RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CDK5R2Q13319 367 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 MRPL49Q13405 166 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ART3Q13508 389 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 SCARB2Q14108 478 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 GNA13Q14344 377 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 FGFBP1Q14512 234 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 VMACQ2NL98 169 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 TMEM44Q2T9K0 475 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 NDUFAF6Q330K2 333 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 WIPI1Q5MNZ9 446 aaPredicted RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 REEP3Q6NUK4 255 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 YRDCQ86U90 279 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 VRK2Q86Y07 508 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 MISPQ8IVT2 679 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 GHDCQ8N2G8 530 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF527Q8NB42 609 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 FAM83FQ8NEG4 500 aaPredicted RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 OR52P1PQ8NH57 321 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 B4GALNT2Q8NHY0 566 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 FBXO27Q8NI29 283 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 PHOSPHO1Q8TCT1 267 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 CNOT9Q92600 299 aaKnown RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ARSGQ96EG1 525 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 NSL1Q96IY1 281 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ECSITQ9BQ95 431 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 OR2B2Q9GZK3 357 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 LAT2Q9GZY6 243 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 SLC6A15Q9H2J7 730 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 PIF1Q9H611 641 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.72□□□□□ -1.33
LINC01049-201ENST00000426840 CARD8Q9Y2G2 431 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF835Q9Y2P0 537 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 L3MBTL1Q9Y468 752 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 CHST2Q9Y4C5 530 aa6.72□□□□□ -1.33
LINC01049-201ENST00000426840 ZNF462Q96JM2 2506 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 TMEM247A6NEH6 219 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 ANKUB1A6NFN9 424 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CCT8L1PA6NM43 557 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 H3BNH8 94 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 PYCARD-AS1I3L0S3 204 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 M0QX08 132 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 NME4O00746 187 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 AQP7O14520 342 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 ZNF264O43296 627 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 HCRTR2O43614 444 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 EFNA2O43921 213 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 GMFGO60234 142 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 TPST1O60507 370 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CDC40O60508 579 aaKnown RBP eCLIP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 HCN1O60741 890 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 MFN2O95140 757 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 EPPINO95925 133 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CSTAP01040 98 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 PABPC4LP0CB38 370 aaKnown RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 ETS2P15036 469 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 IL7RP16871 459 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 GNLYP22749 145 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 DPP4P27487 766 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CPOXP36551 454 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 NUDT2P50583 147 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 P2RX1P51575 399 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 EEF1A1P68104 462 aaKnown RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 HPCAP84074 193 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 SLC25A3Q00325 362 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 SKP2Q13309 424 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 VEZF1Q14119 521 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 TOMM34Q15785 309 aaPredicted RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CYP51A1Q16850 503 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 GLYR1Q49A26 553 aaPredicted RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 VASNQ6EMK4 673 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 ARSKQ6UWY0 536 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 GFRALQ6UXV0 394 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 Q6ZPB1 254 aaPredicted RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CCDC80Q76M96 950 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 EIF3MQ7L2H7 374 aaKnown RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 TRPM8Q7Z2W7 1104 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CMIPQ8IY22 773 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 PEX5LQ8IYB4 626 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 CLIP4Q8N3C7 705 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 ZNF614Q8N883 585 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 C11orf65Q8NCR3 313 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 HIPK4Q8NE63 616 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 FAM71CQ8NEG0 241 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 OR4K17Q8NGC6 315 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 OR5W2Q8NH69 310 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 BBS10Q8TAM1 723 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 NEIL3Q8TAT5 605 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 POC1BQ8TC44 478 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 GPR119Q8TDV5 335 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 C1GALT1C1Q96EU7 318 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 SH3YL1Q96HL8 342 aaPredicted RBP6.71□□□□□ -1.34
LINC01049-201ENST00000426840 NPAS1Q99742 590 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 SPATA9Q9BWV2 254 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 PTGES2Q9H7Z7 377 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 HHATLQ9HCP6 504 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 RLIMQ9NVW2 624 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 TAS2R10Q9NYW0 307 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 TMEM181Q9P2C4 612 aa6.71□□□□□ -1.34
LINC01049-201ENST00000426840 SPRR3Q9UBC9 169 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms