RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TSPAN2O60636 221 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 ICOSLGO75144 302 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 LCN1P31025 176 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 EMP2P54851 167 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 PLA2G2CQ5R387 149 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 NFAM1Q8NET5 270 aaPredicted RBP24.33■■□□□ 1.49
LDB1-202ENST00000425280 TMEM163Q8TC26 289 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 RAB2BQ8WUD1 216 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 FCGR1BQ92637 280 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 LRR1Q96L50 414 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 SAMD8Q96LT4 415 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 SLC38A2Q96QD8 506 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 SPSB2Q99619 263 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 RXFP3Q9NSD7 469 aa24.33■■□□□ 1.49
LDB1-202ENST00000425280 TRIM64BA6NI03 449 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 AHCYL1O43865 530 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 CPNE3O75131 537 aaKnown RBP24.33■■□□□ 1.48
LDB1-202ENST00000425280 NGFRP08138 427 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 UBL4AP11441 157 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 CCL4P13236 92 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 IL12BP29460 328 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 SKP2Q13309 424 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 MEDAGQ5VYS4 303 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 SLC16A12Q6ZSM3 486 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 CDK20Q8IZL9 346 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 GALNT15Q8N3T1 639 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 PHOSPHO1Q8TCT1 267 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 BRIX1Q8TDN6 353 aaKnown RBP24.33■■□□□ 1.48
LDB1-202ENST00000425280 METTL21AQ8WXB1 218 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 HSPBAP1Q96EW2 488 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 ZNF582Q96NG8 517 aaPredicted RBP24.33■■□□□ 1.48
LDB1-202ENST00000425280 SLC26A1Q9H2B4 701 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 AKIRIN1Q9H9L7 192 aaPredicted RBP24.33■■□□□ 1.48
LDB1-202ENST00000425280 IL20RAQ9UHF4 553 aa24.33■■□□□ 1.48
LDB1-202ENST00000425280 RPL36Q9Y3U8 105 aaKnown RBP24.33■■□□□ 1.48
LDB1-202ENST00000425280 HEATR5AQ86XA9 2040 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 SAGE2PA6NJ88 616 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 ENO4A6NNW6 628 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 ZNF28P17035 718 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 FXYD6P3P58550 94 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 ZNF91Q05481 1191 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 PLCXD2Q0VAA5 305 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 PGGHGQ32M88 737 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 PLAG1Q6DJT9 500 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 SLCO6A1Q86UG4 719 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 SLC34A3Q8N130 599 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 C17orf47Q8NEP4 570 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 YIPF6Q96EC8 236 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 CDCA4Q9BXL8 241 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 SEMA4CQ9C0C4 833 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 ENPP5Q9UJA9 477 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 R4GN57 208 aa24.32■■□□□ 1.48
LDB1-202ENST00000425280 FLRT2O43155 660 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 DBTP11182 482 aaKnown RBP24.31■■□□□ 1.48
LDB1-202ENST00000425280 ST13P50502 369 aaKnown RBP24.31■■□□□ 1.48
LDB1-202ENST00000425280 MLLT10P55197 1068 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 ANKRD13BQ86YJ7 626 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 APCDD1LQ8NCL9 501 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 FANK1Q8TC84 345 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 OMA1Q96E52 524 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 PRRG3Q9BZD7 231 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 OR52D1Q9H346 318 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 GPR52Q9Y2T5 361 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 CH25HO95992 272 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 ABCD3P28288 659 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 RNF4P78317 190 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 MC2RQ01718 297 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 HHATLQ9HCP6 504 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 EXOSC3Q9NQT5 275 aaKnown RBP24.31■■□□□ 1.48
LDB1-202ENST00000425280 TAS2R16Q9NYV7 291 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 CARD8Q9Y2G2 431 aa24.31■■□□□ 1.48
LDB1-202ENST00000425280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 TMX2-CTNND1H3BSU7 103 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 SURF4O15260 269 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 SH3BGRP55822 239 aaPredicted RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 COPZ1P61923 177 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 MRPL14Q6P1L8 145 aaKnown RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 CBLN3Q6UW01 205 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 HSDL2Q6YN16 418 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 OR2T33Q8NG76 320 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 OR13C2Q8NGS9 318 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 DNAJA4Q8WW22 397 aaPredicted RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 UBQLN3Q9H347 655 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.3■■□□□ 1.482e-6■□□□□ 11.3
LDB1-202ENST00000425280 EFCAB9A8MZ26 197 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 GTPBP1O00178 669 aaKnown RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 ZNF264O43296 627 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 PTHP01270 115 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 ADORA3P0DMS8 318 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 CACTIN-AS1Q8N1I8 211 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 WDR77Q9BQA1 342 aaPredicted RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 DCUN1D5Q9BTE7 237 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 CRB3Q9BUF7 120 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 TEX12Q9BXU0 123 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 RTN4RQ9BZR6 473 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 ENKD1Q9H0I2 346 aa24.3■■□□□ 1.48
LDB1-202ENST00000425280 GPN2Q9H9Y4 310 aaPredicted RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 PPIEQ9UNP9 301 aaKnown RBP24.3■■□□□ 1.48
LDB1-202ENST00000425280 A0A1W2PPW3 197 aa24.29■■□□□ 1.48
LDB1-202ENST00000425280 GNB5O14775 395 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms