RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 U3KQV3 271 aa13.03□□□□□ -0.32
SHMT1P1-201ENST00000419974 SAC3D1A6NKF1 404 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 E9PQ18 207 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 PDLIM1O00151 329 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 GTPBP1O00178 669 aaKnown RBP13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 EI24O14681 340 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 FRS3O43559 492 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 CCNB2O95067 398 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 SNX4O95219 450 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 ADAP00813 363 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 UBTFL6P0CB48 400 aaPredicted RBP13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 GKN3PP0CG01 181 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 PNMTP11086 282 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 PGCP20142 388 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 CBLP22681 906 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 IFNGR2P38484 337 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC1A3P43003 542 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 UCNP55089 124 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZNF117Q03924 483 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 COX10Q12887 443 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 CBFBQ13951 182 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 WBP2NLQ6ICG8 309 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 C1orf94Q6P1W5 598 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 RTL4Q6ZR62 310 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 PLEKHM3Q6ZWE6 761 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 MARCH3Q86UD3 253 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEM156Q8N614 296 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZNF614Q8N883 585 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 OR10G3Q8NGC4 313 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 KCNE4Q8WWG9 221 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 PRSS27Q9BQR3 290 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 OSBPL11Q9BXB4 747 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC19A3Q9BZV2 496 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 HPF1Q9NWY4 346 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 PDP1Q9P0J1 537 aaPredicted RBP13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 ABI3Q9P2A4 366 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEFF2Q9UIK5 374 aaPredicted RBP13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 RAB26Q9ULW5 256 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 POLHQ9Y253 713 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 WIF1Q9Y5W5 379 aa13.02□□□□□ -0.33
SHMT1P1-201ENST00000419974 ANKUB1A6NFN9 424 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 H0YAE9 185 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 CEACAM4O75871 244 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 LINGO3P0C6S8 592 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 YAP1P46937 504 aaKnown RBP13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 CYB561P49447 251 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 RAD23AP54725 363 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 COPZ1P61923 177 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 CDC20Q12834 499 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 GANABQ14697 944 aaKnown RBP13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 EXOC3L2Q2M3D2 409 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC25A53Q5H9E4 307 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC22A10Q63ZE4 541 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 DESI1Q6ICB0 168 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 PODNL1Q6PEZ8 512 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 CBLN3Q6UW01 205 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 IGFL2Q6UWQ7 119 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 MBOAT2Q6ZWT7 520 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 GALNT16Q8N428 558 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 FADS6Q8N9I5 356 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 OR10G2Q8NGC3 310 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 B4GALNT2Q8NHY0 566 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 GPR119Q8TDV5 335 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 SNRNP27Q8WVK2 155 aaKnown RBP13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 ST8SIA1Q92185 356 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 NAF1Q96HR8 494 aaKnown RBP13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEM41AQ96HV5 264 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 SMPD3Q9NY59 655 aaPredicted RBP13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 STMN3Q9NZ72 180 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 CARD8Q9Y2G2 431 aa13.01□□□□□ -0.33
SHMT1P1-201ENST00000419974 A0A087WUJ7 227 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 A0A087WUU8 490 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 TRBV4-1A0A0J9YWV2 114 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 A0A1B0GWA3 101 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 C7orf72A4D263 438 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 CPSF4LA6NMK7 179 aaKnown RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 NKX2-8O15522 239 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 EFSO43281 561 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 DENRO43583 198 aaKnown RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 HCRTR2O43614 444 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 MAN1A2O60476 641 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 CDC40O60508 579 aaKnown RBP eCLIP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 WT1P19544 449 aaPredicted RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 HTR3AP46098 478 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 DAPP51397 102 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 RPS6KA3P51812 740 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 AQP4P55087 323 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 CTBP2P56545 445 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 OTUD3Q5T2D3 398 aaPredicted RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 ABHD17BQ5VST6 288 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 BROXQ5VW32 411 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 VASH2Q86V25 355 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 MAGEE2Q8TD90 523 aaPredicted RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 DUSP19Q8WTR2 217 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms