RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 AGAP5A6NIR3 686 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 POLR3GO15318 223 aaPredicted RBP18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 CAPN3P20807 821 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 MAGEA8P43361 318 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 ATP4BP51164 291 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 QPRTQ15274 297 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 ATAD3BQ5T9A4 648 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 LRRC74BQ6ZQY2 392 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 ESPNLQ6ZVH7 1005 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 BTLAQ7Z6A9 289 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 LILRA2Q8N149 483 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 GOLGA6L1Q8N7Z2 621 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 OR2V1Q8NHB1 315 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 RFWD2Q8NHY2 731 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 DYDC1Q8WWB3 177 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 MRGPRX4Q96LA9 322 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 THUMPD3Q9BV44 507 aaKnown RBP18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 RSPO3Q9BXY4 272 aaPredicted RBP18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 SRXN1Q9BYN0 137 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 ACBD3Q9H3P7 528 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 PIGMQ9H3S5 423 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 TPT1P8Q9HAU6 139 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 FOXD3Q9UJU5 478 aaPredicted RBP18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 LIPT1Q9Y234 373 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 GMEB1Q9Y692 573 aa18.48■□□□□ 0.55
PKNOX1-202ENST00000418336 MYO9AB2RTY4 2548 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 GTPBP1O00178 669 aaKnown RBP18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 TNFSF11O14788 317 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 CXCL13O43927 109 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 TFPTP0C1Z6 253 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 UBTFL6P0CB48 400 aaPredicted RBP18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 ETFAP13804 333 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 UQCRC1P31930 480 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 PAGE3Q5JUK9 113 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 LRIF1Q5T3J3 769 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 OR2A2Q6IF42 318 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 ZNF474Q6S9Z5 364 aaPredicted RBP18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 LURAP1LQ8IV03 231 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 C10orf111Q8N326 155 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 ITCHQ96J02 903 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 KLHL15Q96M94 604 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 EXOSC3Q9NQT5 275 aaKnown RBP18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 GALNT8Q9NY28 637 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 PACSIN3Q9UKS6 424 aa18.47■□□□□ 0.55
PKNOX1-202ENST00000418336 EEF1E1-BLOC1S5C9J1V9 151 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 EEF1E1O43324 174 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 KRT75O95678 551 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 CSTAP01040 98 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 BMP2P12643 396 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 EIF1AXP47813 144 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 RPS3AP61247 264 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 SORDQ00796 357 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 CBFBQ13951 182 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 GPAT3Q53EU6 434 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 CGB2Q6NT52 195 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 EIF3MQ7L2H7 374 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 LUZP2Q86TE4 346 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 THOC1Q96FV9 657 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 RMND5AQ9H871 391 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 TMEM45AQ9NWC5 275 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 DNAJB12Q9NXW2 375 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 CHST2Q9Y4C5 530 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 CREBBPQ92793 2442 aa18.46■□□□□ 0.55
PKNOX1-202ENST00000418336 A0A096LPI6 279 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 SS18L1O75177 396 aaPredicted RBP18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 NUDT7P0C024 238 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 PCYT1AP49585 367 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 SESN3P58005 492 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 KCNJ10P78508 379 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 ZNF239Q16600 458 aaKnown RBP18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 CHMP1BQ7LBR1 199 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 P4HA3Q7Z4N8 544 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 SLC38A5Q8WUX1 472 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 ST8SIA1Q92185 356 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 CNOT9Q92600 299 aaKnown RBP18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 RBM24Q9BX46 236 aaKnown RBP18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 ACER3Q9NUN7 267 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 CCDC167Q9P0B6 97 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 ING1Q9UK53 422 aaPredicted RBP18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 SLC35A3Q9Y2D2 325 aa18.45■□□□□ 0.54
PKNOX1-202ENST00000418336 MSTNO14793 375 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 CD8BP10966 210 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 CCKARP32238 428 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 KIR2DL3P43628 341 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 EEF1A1P68104 462 aaKnown RBP18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 SELENBP1Q13228 472 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 RGNQ15493 299 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 EEF1A1P5Q5VTE0 462 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 HBMQ6B0K9 141 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 PLEKHM3Q6ZWE6 761 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 ZZZ3Q8IYH5 903 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 RNF128Q8TEB7 428 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 PMM1Q92871 262 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 OSTF1Q92882 214 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 SPDL1Q96EA4 605 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 CCDC106Q9BWC9 280 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 OPN3Q9H1Y3 402 aaPredicted RBP18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 IKZF5Q9H5V7 419 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 MTHFD2LQ9H903 347 aaPredicted RBP18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 PAQR5Q9NXK6 330 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms