RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TMEM201Q5SNT2 666 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 GKAP1Q5VSY0 366 aaPredicted RBP8.46□□□□□ -1.06
RFFL-203ENST00000413582 AGAP6Q5VW22 663 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 TUSC5Q8IXB3 177 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 C10orf105Q8TEF2 133 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 SLC9A6Q92581 669 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 KLHL15Q96M94 604 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
RFFL-203ENST00000413582 KLHDC3Q9BQ90 382 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 LMF2Q9BU23 707 aaKnown RBP8.46□□□□□ -1.06
RFFL-203ENST00000413582 SRXN1Q9BYN0 137 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 C20orf27Q9GZN8 174 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 HEATR1Q9H583 2144 aaKnown RBP8.46□□□□□ -1.06
RFFL-203ENST00000413582 MED17Q9NVC6 651 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 SNX6Q9UNH7 406 aa8.46□□□□□ -1.06
RFFL-203ENST00000413582 C19orf53Q9UNZ5 99 aaPredicted RBP8.46□□□□□ -1.06
RFFL-203ENST00000413582 GXYLT2A0PJZ3 443 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 SLC35F4A4IF30 521 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 MYO1GB0I1T2 1018 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 ZNF814B7Z6K7 855 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 ALG1L2C9J202 215 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 H7C417 338 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 UPK1AO00322 258 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 NDUFAB1O14561 156 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 HDAC3O15379 428 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 SLITRK5O94991 958 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 PGRP06401 933 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 PABPC4LP0CB38 370 aaKnown RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 UROSP10746 265 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 HSD3B1P14060 373 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 USF1P22415 310 aaPredicted RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 ME2P23368 584 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 HSD3B2P26439 372 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 ARRB2P32121 409 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 TTKP33981 857 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 MPIP34949 423 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 PSMD4P55036 377 aaKnown RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 ITGADQ13349 1161 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 PPA1Q15181 289 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 RNPS1Q15287 305 aaKnown RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 PRSS53Q2L4Q9 553 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 TCHHL1Q5QJ38 904 aaPredicted RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 FAM120AOSQ5T036 256 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 PDSS1Q5T2R2 415 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 GTF2IRD2BQ6EKJ0 949 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 TMEM107Q6UX40 140 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 GPRIN3Q6ZVF9 776 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 BHLHA15Q7RTS1 189 aaPredicted RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 SPATA21Q7Z572 469 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 GTF2IRD2Q86UP8 949 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 OR2L13Q8N349 312 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 ANKS4BQ8N8V4 417 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 POC1BQ8TC44 478 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 C16orf78Q8WTQ4 265 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 FAM168AQ92567 244 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 OSTF1Q92882 214 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 ZBTB8AQ96BR9 441 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 BBS4Q96RK4 519 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 KCNA7Q96RP8 456 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 SHCBP1LQ9BZQ2 653 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 CHODLQ9H9P2 273 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 TNFRSF12AQ9NP84 129 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 CBLN4Q9NTU7 201 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 DDX18Q9NVP1 670 aaKnown RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 NMRK1Q9NWW6 199 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 VPS29Q9UBQ0 182 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 ZDHHC2Q9UIJ5 367 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 MRTO4Q9UKD2 239 aaKnown RBP8.45□□□□□ -1.06
RFFL-203ENST00000413582 KCNS2Q9ULS6 477 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 TRAF6Q9Y4K3 522 aa8.45□□□□□ -1.06
RFFL-203ENST00000413582 GNG14A0A1W2PPG7 69 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 SERTM1A2A2V5 107 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 TRPC5OSA6NMA1 111 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 E7EQL1 145 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 MANBAO00462 879 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 AZIN1O14977 448 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 NDUFB5O43674 189 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 LYPLA1O75608 230 aaPredicted RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 LYZL6O75951 148 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 OXSR1O95747 527 aaPredicted RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 CHEK2O96017 543 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 JUNP05412 331 aaKnown RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 CHRNGP07510 517 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 NGFRP08138 427 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 CSF3P09919 207 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 TIA1P31483 386 aaKnown RBP eCLIP8.44□□□□□ -1.06
RFFL-203ENST00000413582 SFTPDP35247 375 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 GZMKP49863 264 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 HTR6P50406 440 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 ZNF41P51814 821 aaPredicted RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 NCBP2P52298 156 aaKnown RBP eCLIP8.44□□□□□ -1.06
RFFL-203ENST00000413582 FOXA1P55317 472 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 CARD18P57730 90 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 SPOCK1Q08629 439 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 HEPACAMQ14CZ8 416 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 STK11Q15831 433 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 CPTPQ5TA50 214 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 FAM166AQ6J272 317 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 B3GLCTQ6Y288 498 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms