RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PRKRAO75569 313 aaKnown RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 PTHP01270 115 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 STATHP02808 62 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ANKRD34CP0C6C1 535 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 PRKAR1AP10644 381 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 DBTP11182 482 aaKnown RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 CCL4P13236 92 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 LIFP15018 202 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 PVRP15151 417 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ST6GAL1P15907 406 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ENDOUP21128 410 aaKnown RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 FPR3P25089 353 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 MLLT10P55197 1068 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 RAB38P57729 211 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ARF3P61204 181 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 PRKCDQ05655 676 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 FUT5Q11128 374 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 MLLT11Q13015 90 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 RUNX2Q13950 521 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SPHARQ15513 63 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNHIT3Q15649 155 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ZER1Q7Z7L7 766 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 MRGPREQ86SM8 312 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 RBM45Q8IUH3 476 aaKnown RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC34A3Q8N130 599 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 CENPSQ8N2Z9 138 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC43A2Q8N370 569 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 NANOGP1Q8N7R0 232 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 AGBL5Q8NDL9 886 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ZCCHC10Q8TBK6 192 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC9A6Q92581 669 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 KAT2AQ92830 837 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 NKD1Q969G9 470 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 RHNO1Q9BSD3 238 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 MROQ9BYG7 248 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 NXF2Q9GZY0 626 aaKnown RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SAP130Q9H0E3 1048 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 DSN1Q9H410 356 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SOHLH2Q9NX45 425 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 H2AFY2Q9P0M6 372 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SEMA5BQ9P283 1151 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 DAPK2Q9UIK4 370 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 SSR3Q9UNL2 185 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 UGT2A1Q9Y4X1 527 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 ABCA12Q86UK0 2595 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SNRNP200O75643 2136 aaKnown RBP11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 RELNP78509 3460 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 hCG_2014768A0A024R1R8 64 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 A0A075B6Q4 140 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 A0A087WUU8 490 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 A1L4Q6 167 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 TRAPPC13A5PLN9 417 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 WASHC1A8K0Z3 465 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 LOC110117498-PIK3R3F6TDL0 507 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 NKX2-8O15522 239 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 TLX2O43763 284 aaPredicted RBP11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SRPX2O60687 465 aaPredicted RBP11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SOX14O95416 240 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 ACP2P11117 423 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 NT5EP21589 574 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 HSD11B2P80365 405 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF91Q05481 1191 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 TSTQ16762 297 aaKnown RBP11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF628Q5EBL2 1059 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 ARMC4Q5T2S8 1044 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 FRRS1Q6ZNA5 592 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 MBOAT2Q6ZWT7 520 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 VRK2Q86Y07 508 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 KMT5CQ86Y97 462 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 CSNK1A1LQ8N752 337 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 PIK3R3Q92569 461 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 DIO2Q92813 273 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC35B4Q969S0 331 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 ABHD17AQ96GS6 310 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC41A3Q96GZ6 507 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC41A2Q96JW4 573 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 HS6ST2Q96MM7 605 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SDF2Q99470 211 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 PDE7BQ9NP56 450 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 MAN2C1Q9NTJ4 1040 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
SMARCB1-203ENST00000407082 CENPEQ02224 2701 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 LOC100506127A0A0U1RQW1 187 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CPSF4LA6NMK7 179 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 EFCAB7A8K855 629 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF891A8MT65 544 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 J3QRK9 145 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CHST10O43529 356 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 GALR3O60755 368 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CTSVO60911 334 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 EIF2S1P05198 315 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC35E2P0CK97 266 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CAPZA2P47755 286 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 PSMD4P55036 377 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms