RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 CCDC115Q96NT0 180 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 WFIKKN1Q96NZ8 548 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 OR52E6Q96RD3 313 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 MED18Q9BUE0 208 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 ZNF350Q9GZX5 532 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 LAT2Q9GZY6 243 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 TIGARQ9NQ88 270 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 GLRX2Q9NS18 164 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 KLHL28Q9NXS3 571 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 TESMINQ9Y4I5 508 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 GPR45Q9Y5Y3 372 aa11.92□□□□□ -0.5
SDF4-203ENST00000403997 PRRC2AP48634 2157 aaKnown RBP11.92□□□□□ -0.5
SDF4-203ENST00000403997 CENPVL1A0A0U1RR11 272 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 CCDC154A6NI56 674 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 SS18L1O75177 396 aaPredicted RBP11.91□□□□□ -0.5
SDF4-203ENST00000403997 UGT2B17O75795 530 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 HRGP04196 525 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 PGRP06401 933 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 UBTFL6P0CB48 400 aaPredicted RBP11.91□□□□□ -0.5
SDF4-203ENST00000403997 KHKP50053 298 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 QPRTQ15274 297 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 GPAT3Q53EU6 434 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 ZNF621Q6ZSS3 439 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 EIF3MQ7L2H7 374 aaKnown RBP11.91□□□□□ -0.5
SDF4-203ENST00000403997 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 OR6K3Q8NGY3 331 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 ZNF524Q96C55 264 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 ROPN1LQ96C74 230 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 ARSGQ96EG1 525 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 MRGPRX4Q96LA9 322 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 PANX1Q96RD7 426 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 INPP5KQ9BT40 448 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 THUMPD3Q9BV44 507 aaKnown RBP11.91□□□□□ -0.5
SDF4-203ENST00000403997 KLHL4Q9C0H6 718 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 POLE3Q9NRF9 147 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 ZNF226Q9NYT6 803 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 KCNE5Q9UJ90 142 aa11.91□□□□□ -0.5
SDF4-203ENST00000403997 KIAA0513O60268 411 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 C1QCP02747 245 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 GSNP06396 782 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 PABPC4LP0CB38 370 aaKnown RBP11.9□□□□□ -0.5
SDF4-203ENST00000403997 IDO1P14902 403 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 SLC7A1P30825 629 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 ANXA11P50995 505 aaKnown RBP11.9□□□□□ -0.5
SDF4-203ENST00000403997 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 SKP2Q13309 424 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 MAPK14Q16539 360 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 SLC25A53Q5H9E4 307 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 ANKRD34AQ69YU3 496 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 ZNF550Q7Z398 422 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 RNF130Q86XS8 419 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 ZNF619Q8N2I2 560 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 ZNF75CPQ92670 426 aaPredicted RBP11.9□□□□□ -0.5
SDF4-203ENST00000403997 CPNE4Q96A23 557 aaPredicted RBP11.9□□□□□ -0.5
SDF4-203ENST00000403997 ZC3HAV1LQ96H79 300 aaKnown RBP11.9□□□□□ -0.5
SDF4-203ENST00000403997 MARK4Q96L34 752 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 FOXC2Q99958 501 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 SRXN1Q9BYN0 137 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 PLEKHF2Q9H8W4 249 aa11.9□□□□□ -0.5
SDF4-203ENST00000403997 C6orf203Q9P0P8 240 aaPredicted RBP11.9□□□□□ -0.5
SDF4-203ENST00000403997 MED13LQ71F56 2210 aa11.9□□□□□ -0.51
SDF4-203ENST00000403997 HEATR5AQ86XA9 2040 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 RFXANKO14593 260 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 SLC22A3O75751 556 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 NTN1O95631 604 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 RAF1P04049 648 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 IL6P05231 212 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 GUSBP08236 651 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 PGCP20142 388 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 CDKN2CP42773 168 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 SESN3P58005 492 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 HPCAP84074 193 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 FUT5Q11128 374 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 SELENBP1Q13228 472 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 KEAP1Q14145 624 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 TIGD2Q4W5G0 525 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 PDCD4Q53EL6 469 aaKnown RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 AGBL2Q5U5Z8 902 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 TYW3Q6IPR3 259 aaKnown RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 FRRS1Q6ZNA5 592 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 HMGN2P46Q86SG4 172 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 STK32CQ86UX6 486 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 GLB1L3Q8NCI6 653 aaPredicted RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 PIWIL2Q8TC59 973 aaKnown RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 ZFP90Q8TF47 636 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 ABHD3Q8WU67 409 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 ZG16BQ96DA0 208 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 SAP130Q9H0E3 1048 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 QRSL1Q9H0R6 528 aaKnown RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 C12orf49Q9H741 205 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 FANCFQ9NPI8 374 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 SERINC1Q9NRX5 453 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms