RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 KRCC1Q9NPI7 259 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 CLN6Q9NWW5 311 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 PSORS1C1Q9UIG5 152 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 MRPS18BQ9Y676 258 aaKnown RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 FER1L5A0AVI2 2057 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 PTPRQQ9UMZ3 2332 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 SEC14L2O76054 403 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 HBQ1P09105 142 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 PCMT1P22061 227 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 TMPRSS3P57727 454 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 OCA2Q04671 838 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 FGFBP1Q14512 234 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 FAM199XQ6PEV8 388 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 CCDC81Q6ZN84 652 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 PRSS48Q7RTY5 328 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 MEX3DQ86XN8 651 aaKnown RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 NRMQ8IXM6 262 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 SVOPQ8N4V2 548 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 ZSCAN1Q8NBB4 408 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 TRUB1Q8WWH5 349 aaKnown RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 MUL1Q969V5 352 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 FAM46AQ96IP4 442 aaKnown RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 COPS4Q9BT78 406 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 LHPPQ9H008 270 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 TMEM27Q9HBJ8 222 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 DNAJB12Q9NXW2 375 aaKnown RBP12.04□□□□□ -0.48
NDEL1-203ENST00000402554 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 IL17BQ9UHF5 180 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
NDEL1-203ENST00000402554 IGLV3-12A0A075B6K2 115 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 SH3D21A4FU49 640 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 ZNF701M0R085 212 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-203ENST00000402554 MT-ND2P03891 347 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 F8A1P23610 371 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 FPR3P25089 353 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 STAT5AP42229 794 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 SNRPGP62308 76 aaKnown RBP12.03□□□□□ -0.48
NDEL1-203ENST00000402554 EMX1Q04741 257 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-203ENST00000402554 GINS1Q14691 196 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 NKAIN1Q4KMZ8 207 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 GTF2IRD2BQ6EKJ0 949 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 LCN10Q6JVE6 187 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 ZNF613Q6PF04 617 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 RASSF6Q6ZTQ3 369 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 ZNF550Q7Z398 422 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 GTF2IRD2Q86UP8 949 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 KIF18BQ86Y91 864 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 ZNF420Q8TAQ5 688 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-203ENST00000402554 STT3BQ8TCJ2 826 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 MYDGFQ969H8 173 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 SLC35B4Q969S0 331 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 LCORQ96JN0 433 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-203ENST00000402554 PRSS27Q9BQR3 290 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 NUDT9Q9BW91 350 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 NXF5Q9H1B4 397 aaKnown RBP12.03□□□□□ -0.48
NDEL1-203ENST00000402554 PRORYQ9H606 182 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 PTTG2Q9NZH5 202 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 COPS7AQ9UBW8 275 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 SEC16AO15027 2179 aa12.03□□□□□ -0.48
NDEL1-203ENST00000402554 FRG2CA6NGY1 282 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 SERINC4A6NH21 518 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 CLCA1A8K7I4 914 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 ZNF99A8MXY4 864 aaPredicted RBP12.02□□□□□ -0.48
NDEL1-203ENST00000402554 CPNE3O75131 537 aaKnown RBP12.02□□□□□ -0.48
NDEL1-203ENST00000402554 LYPD3O95274 346 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 IL33O95760 270 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 ZGLP1P0C6A0 271 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 DCKP27707 260 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 GIPRP48546 466 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 SMSP52788 366 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 NUDT6P53370 316 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 DCAF7P61962 342 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 DCDP81605 110 aaKnown RBP12.02□□□□□ -0.48
NDEL1-203ENST00000402554 MVKQ03426 396 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 GPR107Q5VW38 600 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 HLA-DQA1Q5Y7H0 255 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 SHISA6Q6ZSJ9 500 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.48
NDEL1-203ENST00000402554 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.48
NDEL1-203ENST00000402554 ESX1Q8N693 406 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 IQCF1Q8N6M8 205 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 OR8J1Q8NGP2 316 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 OR4C3Q8NH37 302 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 TEX47Q8TBZ9 253 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 RNF217Q8TC41 542 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 CT55Q8WUE5 264 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 FAR1Q8WVX9 515 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 GGHQ92820 318 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 EFHD2Q96C19 240 aaPredicted RBP12.02□□□□□ -0.48
NDEL1-203ENST00000402554 ISOC1Q96CN7 298 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 Q96MT0 163 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 IL4I1Q96RQ9 567 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 TRIM2Q9C040 744 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 HOXD1Q9GZZ0 328 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 SLC25A19Q9HC21 320 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 AMBNQ9NP70 447 aa12.02□□□□□ -0.48
NDEL1-203ENST00000402554 FKBP14Q9NWM8 211 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms