RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CPNE5Q9HCH3 593 aa14.09□□□□□ -0.15
VAMP1-202ENST00000396308 USE1Q9NZ43 259 aa14.09□□□□□ -0.15
VAMP1-202ENST00000396308 DKK4Q9UBT3 224 aa14.09□□□□□ -0.15
VAMP1-202ENST00000396308 WASF3Q9UPY6 502 aa14.09□□□□□ -0.15
VAMP1-202ENST00000396308 CHCHD2Q9Y6H1 151 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-202ENST00000396308 DOCK10Q96BY6 2186 aa14.09□□□□□ -0.15
VAMP1-202ENST00000396308 TPRP12270 2363 aaKnown RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 A0A1B0GWA3 101 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 ANKUB1A6NFN9 424 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 ELOA3DA6NLF2 546 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 MAN1A2O60476 641 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 BCAS1O75363 584 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 SNX4O95219 450 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 PNMTP11086 282 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 HTR2AP28223 471 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 CASP3P42574 277 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 ACAA2P42765 397 aaKnown RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 IDH2P48735 452 aaKnown RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 SOX8P57073 446 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 IL1RL1Q01638 556 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 SRSF6Q13247 344 aaKnown RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 COL28A1Q2UY09 1125 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 ELOA3BQ3SY89 546 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 PRAMEF20Q5VT98 475 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 CCDC81Q6ZN84 652 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 LRRC69Q6ZNQ3 347 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 CDK20Q8IZL9 346 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 ELOA3Q8NG57 546 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 PIGXQ8TBF5 258 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 DUSP19Q8WTR2 217 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 RNF138Q8WVD3 245 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 ACOT11Q8WXI4 607 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 PSMF1Q92530 271 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 PSD2Q9BQI7 771 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 GALNT9Q9HCQ5 603 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 KRT84Q9NSB2 600 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 SMPD3Q9NY59 655 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-202ENST00000396308 MGAT4BQ9UQ53 548 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 TMEM5Q9Y2B1 443 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 POFUT2Q9Y2G5 429 aa14.08□□□□□ -0.16
VAMP1-202ENST00000396308 A0A0B4J2E0 115 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 TRBV4-1A0A0J9YWV2 114 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 A0A1B0GX12 115 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 SH3PXD2BA1X283 911 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 ANKRD33BA6NCL7 494 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 A6NL46 340 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 EFSO43281 561 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 TLX3O43711 291 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-202ENST00000396308 GMFGO60234 142 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 CDC40O60508 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
VAMP1-202ENST00000396308 ADAP00813 363 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 RBM34P42696 430 aaKnown RBP14.07□□□□□ -0.16
VAMP1-202ENST00000396308 HTR3AP46098 478 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 LIMS1P48059 325 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 AQP4P55087 323 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 MFAP5Q13361 173 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 DEFB109BQ30KR1 87 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 WLSQ5T9L3 541 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 PODNL1Q6PEZ8 512 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 TTC33Q6PID6 262 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-202ENST00000396308 LINC00696Q6ZRV3 163 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 TMEM179BQ7Z7N9 219 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
VAMP1-202ENST00000396308 AQP11Q8NBQ7 271 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 OR4K5Q8NGD3 323 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 ARSGQ96EG1 525 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 ZNF597Q96LX8 424 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 PRR14Q9BWN1 585 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 ANGPTL4Q9BY76 406 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 TAS2R10Q9NYW0 307 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 LRFN1Q9P244 771 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 NTNG1Q9Y2I2 539 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 PCDHGB6Q9Y5F9 930 aa14.07□□□□□ -0.16
VAMP1-202ENST00000396308 IGLV3-32A0A0A0MS00 114 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 SEMA7AO75326 666 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 SLC25A12O75746 678 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ALPLP05186 524 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ADRB1P08588 477 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 CCL3P10147 92 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ZNF26P17031 533 aaPredicted RBP14.06□□□□□ -0.16
VAMP1-202ENST00000396308 GSTM3P21266 225 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 SLC1A3P43003 542 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 UCNP55089 124 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 PPP2R2BQ00005 443 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 PLAURQ03405 335 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 LAPTM4AQ15012 233 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 CBLN3Q6UW01 205 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 RNF113BQ8IZP6 322 aaKnown RBP14.06□□□□□ -0.16
VAMP1-202ENST00000396308 HS3ST5Q8IZT8 346 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 PSD4Q8NDX1 1056 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ZNF555Q8NEP9 628 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 SLC7A13Q8TCU3 470 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ST8SIA1Q92185 356 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 C5orf34Q96MH7 638 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 C12orf10Q9HB07 376 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 PAPOLBQ9NRJ5 636 aaKnown RBP14.06□□□□□ -0.16
VAMP1-202ENST00000396308 MAN2C1Q9NTJ4 1040 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ANKRD10Q9NXR5 420 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 ICAM5Q9UMF0 924 aa14.06□□□□□ -0.16
VAMP1-202ENST00000396308 MED31Q9Y3C7 131 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms