RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DHFRP00374 187 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 MT-ND5P03915 603 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF888P0CJ79 500 aaPredicted RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 CMPK1P30085 196 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 WASP42768 502 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 DUSP8Q13202 625 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 RPE65Q16518 533 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TJAP1Q5JTD0 557 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 Q7L0L9 218 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 KRT74Q7RTS7 529 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 VN1R4Q7Z5H5 301 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 RANBP3LQ86VV4 465 aaPredicted RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 TPRA1Q86W33 373 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TMEM239Q8WW34 195 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 MED30Q96HR3 178 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TEAD3Q99594 435 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 NDC1Q9BTX1 674 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 MKRN2Q9H000 416 aaKnown RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 CACYBPQ9HB71 228 aaKnown RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 NUDT15Q9NV35 164 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TEKT2Q9UIF3 430 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 FZD7O75084 574 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 TSC22D2O75157 780 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 AGR2O95994 175 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 CEACAM5P06731 702 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 IL9P15248 144 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 BMP7P18075 431 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 CD53P19397 219 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 RPS7P62081 194 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 EIPR1Q53HC9 387 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 PYHIN1Q6K0P9 492 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 OR4N5Q8IXE1 308 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 SMAP2Q8WU79 429 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 C4orf36Q96KX1 117 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 GPR137Q96N19 417 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 OR51V1Q9H2C8 321 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 ZFP64Q9NPA5 681 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 CMC2Q9NRP2 79 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 INPP5EQ9NRR6 644 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 THAP10Q9P2Z0 257 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 MOSPD1Q9UJG1 213 aa16.99■□□□□ 0.31
PCDHA1-202ENST00000394633 PRR23D1E9PI22 279 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 SC5DO75845 299 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 CRYZL1O95825 349 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 THBS1P07996 1170 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 PRR23D2P0DMB1 279 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 NOS3P29474 1203 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 FOXK2Q01167 660 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 TNFRSF17Q02223 184 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF85Q03923 595 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 OR1Q1Q15612 314 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 TRAM1Q15629 374 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 FCRLBQ6BAA4 426 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 RPTNQ6XPR3 784 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 PXKQ7Z7A4 578 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 OR2L13Q8N349 312 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 LRRC17Q8N6Y2 441 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 OR13C2Q8NGS9 318 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 DOK4Q8TEW6 326 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 GAL3ST3Q96A11 431 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 PGLYRP3Q96LB9 341 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 DPAGT1Q9H3H5 408 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 COL4A2P08572 1712 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 A0A1W2PPC1 479 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC22A31A6NKX4 558 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 J3QLW9 94 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 NOS1APO75052 506 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 CLUP10909 449 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF19P17023 458 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 STOMP27105 288 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 ACVR1BP36896 505 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC16A1P53985 500 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 SEC13P55735 322 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 LYPD4Q6UWN0 246 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF782Q6ZMW2 699 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 RFPL4BQ6ZWI9 263 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 AMIGO1Q86WK6 493 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 TIGD4Q8IY51 512 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 RNF113BQ8IZP6 322 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 GAS2L1Q99501 681 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 IFT27Q9BW83 186 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 ADGRL4Q9HBW9 690 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 EMC7Q9NPA0 242 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 STMN3Q9NZ72 180 aa16.98■□□□□ 0.31
PCDHA1-202ENST00000394633 NPIPA5A0A0B4J1W7 369 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 A0A1W2PQ72 361 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 CDHR4A6H8M9 788 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 FAM86C2PA6NEL3 165 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 NPIPA7E9PJI5 369 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 SBK2P0C263 348 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 NPIPA8P0DM63 369 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 RPS4Y1P22090 263 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 OR12D2P58182 307 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 MRPL2Q5T653 305 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ASPGQ86U10 573 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 PAQR7Q86WK9 346 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 GPALPP1Q8IXQ4 340 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 ELMOD2Q8IZ81 293 aa16.97■□□□□ 0.31
PCDHA1-202ENST00000394633 HDDC3Q8N4P3 179 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms