RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SLC35A3Q9Y2D2 325 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 CHP2O43745 196 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 SOX30O94993 753 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 TLX1P31314 330 aaPredicted RBP17.45■□□□□ 0.38
CBX1-202ENST00000393408 C19orf57Q0VDD7 668 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 SLC25A35Q3KQZ1 300 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 BCL2L15Q5TBC7 163 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 PYHIN1Q6K0P9 492 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 CDK20Q8IZL9 346 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 GHDCQ8N2G8 530 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 OR14C36Q8NHC7 312 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 FLVCR1-AS1Q8TAF5 88 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 OR2A5Q96R48 311 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 ERVMER34-1Q9H9K5 563 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 TRPV4Q9HBA0 871 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 SLC22A7Q9Y694 548 aa17.45■□□□□ 0.38
CBX1-202ENST00000393408 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 C7orf66A4D0T2 115 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 J3QLW9 94 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 B3GALT2O43825 422 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 SAGP10523 405 aaPredicted RBP17.44■□□□□ 0.38
CBX1-202ENST00000393408 CLUP10909 449 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 ZNF19P17023 458 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 MAT2AP31153 395 aaKnown RBP17.44■□□□□ 0.38
CBX1-202ENST00000393408 BMP8BP34820 402 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 OR12D2P58182 307 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 FCN2Q15485 313 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 AMZ1Q400G9 498 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 HACD4Q5VWC8 232 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 FAM205BPQ63HN1 556 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 ZNF776Q68DI1 518 aaPredicted RBP17.44■□□□□ 0.38
CBX1-202ENST00000393408 RPTNQ6XPR3 784 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 BMP8AQ7Z5Y6 402 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 SMAP2Q8WU79 429 aaPredicted RBP17.44■□□□□ 0.38
CBX1-202ENST00000393408 OR2M4Q96R27 311 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 MEPEQ9NQ76 525 aaPredicted RBP17.44■□□□□ 0.38
CBX1-202ENST00000393408 MED31Q9Y3C7 131 aa17.44■□□□□ 0.38
CBX1-202ENST00000393408 PRSS38A1L453 326 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 RIIAD1A6NNX1 92 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 CTSVO60911 334 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 FZD7O75084 574 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 PTP4A3O75365 173 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 ACVR1BP36896 505 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 PLAURQ03405 335 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 TCEA2Q15560 299 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 NTRK2Q16620 822 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 SLC36A2Q495M3 483 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 DMKNQ6E0U4 476 aaPredicted RBP17.43■□□□□ 0.38
CBX1-202ENST00000393408 C9orf62Q8N4C0 152 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 COX18Q8N8Q8 333 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 SMPDL3BQ92485 455 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 HSD17B8Q92506 261 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 SCMH1Q96GD3 660 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 PRDM9Q9NQV7 894 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 DUSP22Q9NRW4 184 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 ZNF624Q9P2J8 865 aaPredicted RBP17.43■□□□□ 0.38
CBX1-202ENST00000393408 TRAV27A0A087WT01 109 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 PLRG1O43660 514 aaKnown RBP17.43■□□□□ 0.38
CBX1-202ENST00000393408 APODP05090 189 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 CRMP1Q14194 572 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 SDE2Q6IQ49 451 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 TEX19Q8NA77 164 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 MED28Q9H204 178 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 GHITMQ9H3K2 345 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 SRMSQ9H3Y6 488 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 FBXL4Q9UKA2 621 aa17.43■□□□□ 0.38
CBX1-202ENST00000393408 FABP7O15540 132 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 NDUFB5O43674 189 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 RFPL3O75679 317 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 DHFRP00374 187 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 AK4P27144 223 aaPredicted RBP17.42■□□□□ 0.38
CBX1-202ENST00000393408 SRP9P49458 86 aaKnown RBP17.42■□□□□ 0.38
CBX1-202ENST00000393408 NRG3P56975 720 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 ACSM3Q53FZ2 586 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 CDRT4Q8N9R6 151 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 CYB561A3Q8NBI2 242 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 OR5J2Q8NH18 312 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 OR51A7Q8NH64 312 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 ARSGQ96EG1 525 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 STACQ99469 402 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 C1QTNF7Q9BXJ2 289 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 HAO2Q9NYQ3 351 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 GDE1Q9NZC3 331 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 LRRC72A6NJI9 287 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 PPP1R3DO95685 299 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 FAAH2Q6GMR7 532 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 FIGNL1Q6PIW4 674 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 KRT74Q7RTS7 529 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 SSX6Q7RTT6 188 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 SHISA5Q8N114 240 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 SLC44A3Q8N4M1 653 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 OR4C6Q8NH72 309 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 SLC2A12Q8TD20 617 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 SLC22A18Q96BI1 424 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 PEX11GQ96HA9 241 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 KLHL1Q9NR64 748 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 NUDT15Q9NV35 164 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 NPFFR2Q9Y5X5 522 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms