RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RNASE8Q8TDE3 154 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR148Q8TDV2 347 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 STYXQ8WUJ0 223 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CKAP2Q8WWK9 683 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SGCDQ92629 289 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PSMG2Q969U7 264 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF566Q969W8 418 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 C18orf25Q96B23 403 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF707Q96C28 371 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 BIRC7Q96CA5 298 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 EID2BQ96D98 161 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 OTUB2Q96DC9 234 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM71F1Q96KD3 344 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LRGUKQ96M69 825 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TCEANC2Q96MN5 208 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 NOL4LQ96MY1 436 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2V2Q96R30 315 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CBWD1Q9BRT8 395 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM70Q9BUB7 260 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CHAC1Q9BUX1 264 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPL37Q9BZE1 423 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC19A3Q9BZV2 496 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ROGDIQ9GZN7 287 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 NUP62CLQ9H1M0 184 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TAOK3Q9H2K8 898 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 UNC45AQ9H3U1 944 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RNF167Q9H6Y7 350 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF665Q9H7R5 613 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 DNAJC18Q9H819 358 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 YY1AP1Q9H869 796 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 Q9HAA7 133 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RNPEPL1Q9HAU8 725 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 BRF2Q9HAW0 419 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 S100A14Q9HCY8 104 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CHMP1AQ9HD42 196 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RANGRFQ9HD47 186 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 FANCFQ9NPI8 374 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ASH1LQ9NR48 2969 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PNO1Q9NRX1 252 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CENPMQ9NSP4 180 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PNPLA3Q9NST1 481 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SMC4Q9NTJ3 1288 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TBC1D22BQ9NU19 505 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 DDX19AQ9NUU7 478 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 DCAF13Q9NV06 445 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ETNK2Q9NVF9 386 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 DNAJC11Q9NVH1 559 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPL16Q9NX20 251 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM161AQ9NX61 479 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SAGE1Q9NXZ1 904 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MIS18AQ9NYP9 233 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TAS2R14Q9NYV8 317 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ADD3Q9UEY8 706 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 GIMAP2Q9UG22 337 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PCYOX1Q9UHG3 505 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CTNNA3Q9UI47 895 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 VAX2Q9UIW0 290 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PURGQ9UJV8 347 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 UBQLN1Q9UMX0 589 aaKnown RBP-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CCL26Q9Y258 94 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKRD6Q9Y2G4 727 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SH3GLB1Q9Y371 365 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CEP83Q9Y592 693 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 PCDHGA5Q9Y5G8 931 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 HEBP2Q9Y5Z4 205 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 SNURFQ9Y675 71 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 LHFPL6Q9Y693 200 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 DNAH9Q9NYC9 4486 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 MYH15Q9Y2K3 1946 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 CELSR2Q9HCU4 2923 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 TUBGCP6Q96RT7 1819 aa-0.54□□□□□ -2.5
TRAJ28-201ENST00000390509 RTEL1-TNFRSF6BF6WH68 1400 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ARHGAP32A7KAX9 2087 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKRD30BQ9BXX2 1392 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PLEKHG2Q9H7P9 1386 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 COL12A1Q99715 3063 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CNOT1A5YKK6 2376 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKRD11Q6UB99 2663 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZFC3H1O60293 1989 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 LRP4O75096 1905 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 IGLV3-9A0A075B6K5 115 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV1-3A0A0C4DH29 117 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C2orf92A0A1B0GVN3 265 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MDFIC2A0A1B0GVS7 189 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PLAC8L1A1L4L8 177 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RGSL1A5PLK6 1076 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKUB1A6NFN9 424 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 GAGE10A6NGK3 116 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CASTOR2A6NHX0 329 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF726A6NNF4 738 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 A8MXQ7 604 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C17orf105B2RV13 164 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C19orf81C9J6K1 198 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NPIPA5E9PKD4 350 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 E9PLD3 99 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C11orf98E9PRG8 122 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FNDC10F2Z333 226 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRAMEF26H0Y7S4 382 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 H0YHG0 523 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms