RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 G0S2P27469 103 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 CLDN6P56747 220 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 KIAA0907Q7Z7F0 614 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 CCDC28AQ8IWP9 274 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ENDOVQ8N8Q3 282 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 FNDC9Q8TBE3 224 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 SHISA7A6NL88 538 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 CXCR4P61073 352 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 SFXN5Q8TD22 340 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 DEFB127Q9H1M4 99 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 STEAP1Q9UHE8 339 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 MYH6P13533 1939 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 A8MVM7 634 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 SURF4O15260 269 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 POU3F1Q03052 451 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 GPR17Q13304 367 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 RPL7L1Q6DKI1 246 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 CPEB2Q7Z5Q1 589 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 CMIPQ8IY22 773 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 TVP23CQ96ET8 276 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 PRRC1Q96M27 445 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 PSAT1Q9Y617 370 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 MYH7P12883 1935 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 F5H5P2 479 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 NXPH2O95156 264 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 RNF224P0DH78 156 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 OR2B11Q5JQS5 317 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 KCNJ15Q99712 375 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ERVMER34-1Q9H9K5 563 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 RNF150Q9ULK6 438 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 PXDNQ92626 1479 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 FAM183AA6NL82 134 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 FAM166BA8MTA8 275 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 TBX10O75333 385 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 TOX4O94842 621 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 DHRS4L1P0CG22 281 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 MAOAP21397 527 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ZNF92Q03936 586 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 SMUG1Q53HV7 270 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 NFS1Q9Y697 457 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 F2P00734 622 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 MZT1Q08AG7 82 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 FGFBP1Q14512 234 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 FCRL3Q96P31 734 aaPredicted RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 SORCS2Q96PQ0 1159 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 UTP23Q9BRU9 249 aaKnown RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 NPTNQ9Y639 398 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 DENRO43583 198 aaKnown RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 PRAMEF4O60810 478 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 IQCF3P0C7M6 154 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ETV4P43268 484 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 MTNR1AP48039 350 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 IL13RA1P78552 427 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 SPHARQ15513 63 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 OR7E24Q6IFN5 339 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 SSX7Q7RTT5 188 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 APIPQ96GX9 242 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 OCSTAMPQ9BR26 566 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 APOOQ9BUR5 198 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 CCDC106Q9BWC9 280 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 VN1R3Q9BXE9 311 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 PTTG3PQ9NZH4 202 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 LOC102724200A0A096LPH7 203 aaPredicted RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 LOC102725191A0A1B0GVB3 256 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 PRSS3P35030 304 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 VEGFCP49767 419 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ELAVL3Q14576 367 aaKnown RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 CNN3Q15417 329 aaKnown RBP11.68□□□□□ -0.54
CHD3-203ENST00000380358 DPY19L2P1Q6NXN4 242 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 TMPRSS11FQ6ZWK6 438 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 TTC9BQ8N6N2 239 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 OR51D1Q8NGF3 324 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 CACNG6Q9BXT2 260 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ACTRT3Q9BYD9 372 aa11.68□□□□□ -0.54
CHD3-203ENST00000380358 ZNF736B4DX44 427 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 SCAMP2O15127 329 aaKnown RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 MITFO75030 526 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A6P0DMU7 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A5P0DMU8 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A7P0DMV0 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A8P0DMV1 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A9P0DMV2 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 PSMB5P28074 263 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CARD18P57730 90 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 GK2Q14410 553 aaPredicted RBP11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A2Q5DJT8 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 SLC35D2Q76EJ3 337 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 SYT13Q7L8C5 426 aa11.67□□□□□ -0.54
CHD3-203ENST00000380358 PPP1R3BQ86XI6 285 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms