RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 A6NNC1 897 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 HPNP05981 417 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 HOXB6P17509 224 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 KDELR2P33947 212 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 CASP3P42574 277 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 CASP9P55211 416 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 PCBP3P57721 371 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 EXOSC7Q15024 291 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 HEPHL1Q6MZM0 1159 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 YRDCQ86U90 279 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 ZNF615Q8N8J6 731 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 OR52R1Q8NGF1 315 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 OR5D16Q8NGK9 328 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 RAB8BQ92930 207 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 FAM162AQ96A26 154 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 RSRC1Q96IZ7 334 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 RNF145Q96MT1 663 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 SECISBP2Q96T21 854 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 FOXC2Q99958 501 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 ITPAQ9BY32 194 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 UGT2B28Q9BY64 529 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 PIGUQ9H490 435 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 S100A14Q9HCY8 104 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 BCL2L10Q9HD36 194 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 RASSF1Q9NS23 344 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
PRPF18-202ENST00000378572 EXD2Q9NVH0 621 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 PRODH2Q9UF12 536 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 DTX4Q9Y2E6 619 aa12.47□□□□□ -0.41
PRPF18-202ENST00000378572 TUBAL3A6NHL2 446 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 H0Y3Z8 333 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 SYT5O00445 386 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 PPM1BO75688 479 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 NKX2-2O95096 273 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 ATP6V1G2O95670 118 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 AK1P00568 194 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 ACP2P11117 423 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 CYP4B1P13584 511 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 BMP7P18075 431 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 SLC7A1P30825 629 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 TIMP3P35625 211 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 EMDP50402 254 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 MRPS22P82650 360 aaKnown RBP12.46□□□□□ -0.41
PRPF18-202ENST00000378572 MAPK11Q15759 364 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 DCST1Q5T197 706 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 ATAD3BQ5T9A4 648 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 PATL1Q86TB9 770 aaKnown RBP12.46□□□□□ -0.41
PRPF18-202ENST00000378572 CDC20BQ86Y33 519 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 KIF18BQ86Y91 864 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 SLC16A11Q8NCK7 471 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 SIMC1Q8NDZ2 872 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 OR14L1PQ8NHC6 308 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 NFKBIDQ8NI38 313 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 XAGE5Q8WWM1 108 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 ADIPOR1Q96A54 375 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 OMA1Q96E52 524 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 VSTM2LQ96N03 204 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 YIPF4Q9BSR8 244 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 PRDM14Q9GZV8 571 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 EQTNQ9NQ60 294 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 CALML5Q9NZT1 146 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.41
PRPF18-202ENST00000378572 FOXD3Q9UJU5 478 aaPredicted RBP12.46□□□□□ -0.41
PRPF18-202ENST00000378572 RPS6KA6Q9UK32 745 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 CBLCQ9ULV8 474 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.41
PRPF18-202ENST00000378572 ITPR3Q14573 2671 aa12.46□□□□□ -0.41
PRPF18-202ENST00000378572 FREM3P0C091 2139 aa12.46□□□□□ -0.42
PRPF18-202ENST00000378572 AKAP6Q13023 2319 aa12.46□□□□□ -0.42
PRPF18-202ENST00000378572 DHRS12A0PJE2 317 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 PRAMEF27A3QJZ7 478 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 KRT36O76013 467 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 BCHEP06276 602 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 ALOX5P09917 674 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 PSMA4P25789 261 aaKnown RBP12.45□□□□□ -0.42
PRPF18-202ENST00000378572 CEACAM8P31997 349 aaPredicted RBP12.45□□□□□ -0.42
PRPF18-202ENST00000378572 ZNF136P52737 540 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 CRISP3P54108 245 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 SRYQ05066 204 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 TIGD3Q6B0B8 471 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 VASNQ6EMK4 673 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 CBLL1Q75N03 491 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 ADGRG5Q8IZF4 528 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 FAM83FQ8NEG4 500 aaPredicted RBP12.45□□□□□ -0.42
PRPF18-202ENST00000378572 BBS10Q8TAM1 723 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 SLC35A4Q96G79 324 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 TRNT1Q96Q11 434 aaKnown RBP12.45□□□□□ -0.42
PRPF18-202ENST00000378572 UBQLN3Q9H347 655 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 RNPEPL1Q9HAU8 725 aa12.45□□□□□ -0.42
PRPF18-202ENST00000378572 FOLH1BQ9HBA9 442 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms