RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 IFT27Q9BW83 186 aa10.12□□□□□ -0.79
BEST1-201ENST00000378043 OR51V1Q9H2C8 321 aa10.12□□□□□ -0.79
BEST1-201ENST00000378043 KCNN2Q9H2S1 579 aa10.12□□□□□ -0.79
BEST1-201ENST00000378043 CACYBPQ9HB71 228 aaKnown RBP10.12□□□□□ -0.79
BEST1-201ENST00000378043 ADGRL4Q9HBW9 690 aa10.12□□□□□ -0.79
BEST1-201ENST00000378043 MAT2BQ9NZL9 334 aa10.12□□□□□ -0.79
BEST1-201ENST00000378043 LRP4O75096 1905 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 A0A087WV62 115 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 A0A0G2JK05 382 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 A0A1B0GVC2 190 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 ANKRD34BA5PLL1 514 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 OR6C74A6NCV1 312 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 OR6C70A6NIJ9 312 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 A6NIN4 97 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 FAM25AB3EWG3 89 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 FAM25CB3EWG5 89 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 FAM25GB3EWG6 89 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 HYAL3O43820 417 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 BRINP1O60477 761 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SLC19A2O60779 497 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SC5DO75845 299 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 HOXC4P09017 264 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 ZNF85Q03923 595 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SYCE2Q6PIF2 218 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SFTPA2Q8IWL1 248 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 CDRT4Q8N9R6 151 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 CYB561A3Q8NBI2 242 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 OR4M1Q8NGD0 313 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 OR5M3Q8NGP4 307 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 OR51A7Q8NH64 312 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 PATE1Q8WXA2 126 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 ACOT12Q8WYK0 555 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 LYRM4Q9HD34 91 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 TRIM36Q9NQ86 728 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 PRDM9Q9NQV7 894 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 ACTR10Q9NZ32 417 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 FLRT3Q9NZU0 649 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 USP36Q9P275 1121 aaKnown RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 KLHL21Q9UJP4 597 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 HEATR5AQ86XA9 2040 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 EML5Q05BV3 1969 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 PRR23D1E9PI22 279 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 LINC01565O15544 149 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 FMO6PO60774 539 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 RCBTB2O95199 551 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 GPR75O95800 540 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 NGFRP08138 427 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SBK2P0C263 348 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 PRR23D2P0DMB1 279 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 SAGP10523 405 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 NT5EP21589 574 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 OR12D2P58182 307 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SHC2P98077 582 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 ADAM15Q13444 863 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 CRMP1Q14194 572 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 DGAT2L6Q6ZPD8 337 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 VASH1Q7L8A9 365 aaPredicted RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 SSX6Q7RTT6 188 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 LIX1LQ8IVB5 337 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 CNOT9Q92600 299 aaKnown RBP10.11□□□□□ -0.79
BEST1-201ENST00000378043 TRIM63Q969Q1 353 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 CTHRC1Q96CG8 243 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 PGLYRP3Q96LB9 341 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 STACQ99469 402 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 RASD1Q9Y272 281 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SLC35A3Q9Y2D2 325 aa10.11□□□□□ -0.79
BEST1-201ENST00000378043 SLC22A31A6NKX4 558 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 HCRTR1O43613 425 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 SLC43A1O75387 559 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 RASGRP1O95267 797 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 GYPBP06028 91 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 ARSBP15848 533 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 LAMA1P25391 3075 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 BMP8BP34820 402 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 GABRA3P34903 492 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 SLC16A1P53985 500 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 TFF2Q03403 129 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 FAPQ12884 760 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 AMZ1Q400G9 498 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 SNAP47Q5SQN1 464 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 ANKRD54Q6NXT1 300 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 ZC3H14Q6PJT7 736 aaKnown RBP10.1□□□□□ -0.79
BEST1-201ENST00000378043 ABHD13Q7L211 337 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 BMP8AQ7Z5Y6 402 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 PXKQ7Z7A4 578 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 OAFQ86UD1 273 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 LRRC28Q86X40 367 aaPredicted RBP10.1□□□□□ -0.79
BEST1-201ENST00000378043 RFLNBQ8N5W9 214 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 CAMKVQ8NCB2 501 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 ABHD4Q8TB40 342 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 GRHL3Q8TE85 626 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 ELSPBP1Q96BH3 223 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 PEX11GQ96HA9 241 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 C4orf36Q96KX1 117 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 WDR92Q96MX6 357 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 NECTIN4Q96NY8 510 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
BEST1-201ENST00000378043 SYNDIG1Q9H7V2 258 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms