RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CCR4P51679 360 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 DLX5P56178 289 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 PCBP3P57721 371 aaKnown RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 TMEM211Q6ICI0 200 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 DHRS4L2Q6PKH6 230 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 PATL1Q86TB9 770 aaKnown RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 OR5M9Q8NGP3 310 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 CNOT9Q92600 299 aaKnown RBP11.98□□□□□ -0.49
CKAP2-202ENST00000378034 TNFRSF10DQ9UBN6 386 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 MEMO1Q9Y316 297 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF337Q9Y3M9 751 aa11.98□□□□□ -0.49
CKAP2-202ENST00000378034 HELZ2Q9BYK8 2649 aaKnown RBP11.97□□□□□ -0.49
CKAP2-202ENST00000378034 CLDN24A6NM45 220 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 FAM220BPB1ANY3 271 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF708P17019 499 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 PRKCAP17252 672 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 POU3F2P20265 443 aaPredicted RBP11.97□□□□□ -0.49
CKAP2-202ENST00000378034 PSMA4P25789 261 aaKnown RBP11.97□□□□□ -0.49
CKAP2-202ENST00000378034 EEFSECP57772 596 aaKnown RBP11.97□□□□□ -0.49
CKAP2-202ENST00000378034 PLAURQ03405 335 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 QPRTQ15274 297 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF585AQ6P3V2 769 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 CCDC80Q76M96 950 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF550Q7Z398 422 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 FJX1Q86VR8 437 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 SLC15A3Q8IY34 581 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ULK2Q8IYT8 1036 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ZPLD1Q8TCW7 415 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ACER3Q9NUN7 267 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 ARL8BQ9NVJ2 186 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 CMTM6Q9NX76 183 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 NDE1Q9NXR1 346 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 CAMK2AQ9UQM7 478 aa11.97□□□□□ -0.49
CKAP2-202ENST00000378034 CFAP73A6NFT4 308 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 NTN1O95631 604 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 TCEA1P23193 301 aaKnown RBP11.96□□□□□ -0.49
CKAP2-202ENST00000378034 CLDN18P56856 261 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 PSME3P61289 254 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 RAC1P63000 192 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 DCST1Q5T197 706 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 C1orf185Q5T7R7 199 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 ARMC8Q8IUR7 673 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 MEIOBQ8N635 442 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 OR2T12Q8NG77 320 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 RNF145Q96MT1 663 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 DMRTA2Q96SC8 542 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 KLHDC3Q9BQ90 382 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 PINK1Q9BXM7 581 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 SH3BGRL2Q9UJC5 107 aa11.96□□□□□ -0.49
CKAP2-202ENST00000378034 ERRFI1Q9UJM3 462 aaPredicted RBP11.96□□□□□ -0.49
CKAP2-202ENST00000378034 HEATR5AQ86XA9 2040 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 SEMA7AO75326 666 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 BCAS1O75363 584 aaPredicted RBP11.96□□□□□ -0.5
CKAP2-202ENST00000378034 AGFG2O95081 481 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 MFN2O95140 757 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 ME2P23368 584 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 HTR3AP46098 478 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 STARP49675 285 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 SLC7A2P52569 658 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 EPS8Q12929 822 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 FOXF1Q12946 379 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 TOMM34Q15785 309 aaPredicted RBP11.96□□□□□ -0.5
CKAP2-202ENST00000378034 B3GNT6Q6ZMB0 384 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 CLIP4Q8N3C7 705 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 OR5M1Q8NGP8 315 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 FBXO27Q8NI29 283 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 ZNF563Q8TA94 476 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 RASSF5Q8WWW0 418 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 NSL1Q96IY1 281 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 PIF1Q9H611 641 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 SPAG4Q9NPE6 437 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 RLIMQ9NVW2 624 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 ABCD2Q9UBJ2 740 aa11.96□□□□□ -0.5
CKAP2-202ENST00000378034 GCN1Q92616 2671 aaKnown RBP11.95□□□□□ -0.5
CKAP2-202ENST00000378034 ELOVL7A1L3X0 281 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 GJE1A6NN92 205 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 H0Y3Z8 333 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 H3BML4 177 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 M0QX08 132 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 GCM2O75603 506 aaPredicted RBP11.95□□□□□ -0.5
CKAP2-202ENST00000378034 EPPINO95925 133 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 C8BP07358 591 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 GP1BBP13224 206 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 FKBP2P26885 142 aaKnown RBP11.95□□□□□ -0.5
CKAP2-202ENST00000378034 AQP1P29972 269 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 RYKP34925 604 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 APOBEC1P41238 236 aaKnown RBP11.95□□□□□ -0.5
CKAP2-202ENST00000378034 SESN3P58005 492 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 LIPEQ05469 1076 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 RPTNQ6XPR3 784 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 MICU2Q8IYU8 434 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 UCN2Q96RP3 112 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 KLHL28Q9NXS3 571 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 ALKBH4Q9NXW9 302 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 SLC13A4Q9UKG4 626 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
CKAP2-202ENST00000378034 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms