RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CTSBP07858 339 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 CT62P0C5K7 136 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ZNF10P21506 573 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 HTR1FP30939 366 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 PRKAR1BP31321 381 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 LIMK1P53667 647 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 BNC1Q01954 994 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ADAM15Q13444 863 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ANKRD54Q6NXT1 300 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 SERPINA12Q8IW75 414 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 CAMKVQ8NCB2 501 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 OR4M1Q8NGD0 313 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 OR52R1Q8NGF1 315 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 PEX11GQ96HA9 241 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 WDR92Q96MX6 357 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 PITHD1Q9GZP4 211 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 GDE1Q9NZC3 331 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 TRAPPC4Q9Y296 219 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 SLC17A4Q9Y2C5 497 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 SF3B6Q9Y3B4 125 aaKnown RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 HEBP2Q9Y5Z4 205 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 A0A0A6YYC8 382 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 TRDV1A0A1B0GX56 115 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ANKRD61A6NGH8 418 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 BLOC1S5-TXNDC5H3BN57 136 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 I3L1I5 382 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 SYT5O00445 386 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 RGS9O75916 674 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 SNRPBP14678 240 aaKnown RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 DRD5P21918 477 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 POU6F2P78424 691 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 FOXK2Q01167 660 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ALG10BQ5I7T1 473 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ABHD13Q7L211 337 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 MEPCEQ7L2J0 689 aaKnown RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 C17orf47Q8NEP4 570 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 GCDHQ92947 438 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 PPIL3Q9H2H8 161 aaKnown RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 NDOR1Q9UHB4 597 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ADAM18Q9Y3Q7 739 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 RWDD3Q9Y3V2 267 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 KDM4EB2RXH2 506 aaPredicted RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 LANCL1O43813 399 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 EGFP01133 1207 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 MT-ND5P03915 603 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 SYPP08247 313 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ZGLP1P0C6A0 271 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ASAH1Q13510 395 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 EIPR1Q53HC9 387 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 LYPD4Q6UWN0 246 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 PAQR7Q86WK9 346 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 LRRC17Q8N6Y2 441 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 CSNK1A1LQ8N752 337 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 GIMAP5Q96F15 307 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 GAL3ST1Q99999 423 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 RNF32Q9H0A6 362 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 KIR3DX1Q9H7L2 352 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 NUDT15Q9NV35 164 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 ING3Q9NXR8 418 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 CLDND1Q9NY35 253 aa11.99□□□□□ -0.49
USP11-204ENST00000377107 URB1O60287 2271 aaKnown RBP11.99□□□□□ -0.49
USP11-204ENST00000377107 A0A0B4J293 547 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 CDHR4A6H8M9 788 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ORC5O43913 435 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 TOXO94900 526 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 RCBTB2O95199 551 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 CELA2BP08218 269 aaPredicted RBP11.98□□□□□ -0.49
USP11-204ENST00000377107 HPGDP15428 266 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ENDOUP21128 410 aaKnown RBP11.98□□□□□ -0.49
USP11-204ENST00000377107 EVX1P49640 407 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 HYAL4Q2M3T9 481 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 SLC25A35Q3KQZ1 300 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 TMEM91Q6ZNR0 172 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ZNF619Q8N2I2 560 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 TRMT10AQ8TBZ6 339 aaKnown RBP11.98□□□□□ -0.49
USP11-204ENST00000377107 SMPDL3BQ92485 455 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 SLC22A18Q96BI1 424 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 MSLNLQ96KJ4 702 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 COQ7Q99807 217 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ZFYVE21Q9BQ24 234 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ALPK3Q96L96 1907 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 STK25O00506 426 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 IMPA2O14732 288 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 EIF4EP06730 217 aaKnown RBP11.98□□□□□ -0.49
USP11-204ENST00000377107 FCARP24071 287 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ACSM3Q53FZ2 586 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 PRSS45Q7RTY3 260 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 RFLNBQ8N5W9 214 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 TEAD3Q99594 435 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 THAP7Q9BT49 309 aaPredicted RBP11.98□□□□□ -0.49
USP11-204ENST00000377107 GSDMCQ9BYG8 508 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 LMAN2LQ9H0V9 348 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 SLC25A18Q9H1K4 315 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 RMI1Q9H9A7 625 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 IER3IP1Q9Y5U9 82 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ZNF3P17036 446 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 MAOBP27338 520 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms