RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NPDC1Q9NQX5 325 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-201ENST00000376656 A0A1W2PR48 441 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 UNC119BA6NIH7 251 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 L7N2F9 121 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 BHLHE40O14503 412 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 ARPC1BO15143 372 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 MAGEB4O15481 346 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 TGM6O95932 706 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 RAD52P43351 418 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 ZNF273Q14593 569 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 PRAMEF8Q5VWM4 474 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 PRAMEF7Q5VXH5 474 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 FAM198BQ6UWH4 519 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 OR56A1Q8NGH5 318 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 TEAD3Q99594 435 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 ABRACLQ9P1F3 81 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 AK6Q9Y3D8 172 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 C17orf113A0A1B0GUU1 675 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 A0A1W2PPV9 198 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 SLC22A23A1A5C7 686 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 GATBO75879 557 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 PROS1P07225 676 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 MAKP20794 623 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 KIAA1024LP59773 190 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 DMKNQ6E0U4 476 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 SLC25A25Q6KCM7 469 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 LINGO2Q7L985 606 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 RFLNBQ8N5W9 214 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 NUP43Q8NFH3 380 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 PFN4Q8NHR9 129 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 LGALS14Q8TCE9 139 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 BRIX1Q8TDN6 353 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 LINC00615Q96LM1 132 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 SLC23A2Q9UGH3 650 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 FBXL4Q9UKA2 621 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 OR5F1O95221 314 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 NMBP08949 121 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 SAGP10523 405 aaPredicted RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 PSMB1P20618 241 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 TEAD1P28347 426 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 TRA2BP62995 288 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 C18orf63Q68DL7 685 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 FAM98AQ8NCA5 519 aaKnown RBP15.32■□□□□ 0.04
TRIM39-201ENST00000376656 COQ8AQ8NI60 647 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 NUS1Q96E22 293 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 C20orf141Q9NUB4 165 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 EMC3Q9P0I2 261 aa15.32■□□□□ 0.04
TRIM39-201ENST00000376656 LRIT2A6NDA9 550 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 H3BUI4 141 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 LPLP06858 475 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 SBK2P0C263 348 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ERGP11308 486 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ATP5A1P25705 553 aaKnown RBP15.31■□□□□ 0.04
TRIM39-201ENST00000376656 PRKAR1BP31321 381 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 NRG3P56975 720 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ALKAL2Q6UX46 152 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 CMTM4Q8IZR5 234 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 OR9A2Q8NGT5 310 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 PEX11GQ96HA9 241 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 FN3KQ9H479 309 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ADGRL4Q9HBW9 690 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 HMX1Q9NP08 348 aaPredicted RBP15.31■□□□□ 0.04
TRIM39-201ENST00000376656 FLRT2O43155 660 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 IFNA16P05015 189 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 PRKACAP17612 351 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 HOXD10P28358 340 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 CSNK1G2P78368 415 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 MAPK14Q16539 360 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 THSD4Q6ZMP0 1018 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 WDR88Q6ZMY6 472 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 STPG2Q8N412 459 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 OR52L1Q8NGH7 329 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ZNF671Q8TAW3 534 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 TM7SF3Q9NS93 570 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 SIDT1Q9NXL6 827 aaKnown RBP15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ST6GALNAC2Q9UJ37 374 aa15.31■□□□□ 0.04
TRIM39-201ENST00000376656 ING1Q9UK53 422 aaPredicted RBP15.31■□□□□ 0.04
TRIM39-201ENST00000376656 MDC1Q14676 2089 aaKnown RBP15.31■□□□□ 0.04
TRIM39-201ENST00000376656 TCRBV16S1A1N1A0A5B0 115 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 PRR23D1E9PI22 279 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-201ENST00000376656 MID1O15344 667 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 GYPBP06028 91 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 PRR23D2P0DMB1 279 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-201ENST00000376656 HCCSP53701 268 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 TAS2R43P59537 309 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 DHODHQ02127 395 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 HTR4Q13639 388 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 SLC9A5Q14940 896 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 LTB4RQ15722 352 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 METTL11BQ5VVY1 283 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 OR5M10Q6IEU7 315 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 TEX19Q8NA77 164 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 CYB561A3Q8NBI2 242 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 SMPDL3BQ92485 455 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
TRIM39-201ENST00000376656 IRF7Q92985 503 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 LCORQ96JN0 433 aaPredicted RBP15.3■□□□□ 0.04
TRIM39-201ENST00000376656 NANSQ9NR45 359 aa15.3■□□□□ 0.04
TRIM39-201ENST00000376656 SESN1Q9Y6P5 492 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms