RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ANKRD28O15084 1053 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 STX11O75558 287 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 GUSBP08236 651 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 EFNA1P20827 205 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-204ENST00000376643 ENPP1P22413 925 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 CCR4P51679 360 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 CAPRIN1Q14444 709 aaKnown RBP13.13□□□□□ -0.31
HDAC6-204ENST00000376643 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 Q6ZT83 130 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 P2RY8Q86VZ1 359 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 TUSC5Q8IXB3 177 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 IGFBPL1Q8WX77 278 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 MUCL1Q96DR8 90 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 OR7D2Q96RA2 312 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 C1orf50Q9BV19 199 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 LAT2Q9GZY6 243 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 CXorf36Q9H7Y0 433 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 BARX1Q9HBU1 254 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-204ENST00000376643 POLE3Q9NRF9 147 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 ASIC5Q9NY37 505 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
HDAC6-204ENST00000376643 NSD1Q96L73 2696 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-204ENST00000376643 TRIM64A6NGJ6 449 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 SERINC4A6NH21 518 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 TRIM64BA6NI03 449 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF724A8MTY0 619 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 NPIPB9F8W1W9 429 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 RNASET2O00584 256 aaKnown RBP13.12□□□□□ -0.31
HDAC6-204ENST00000376643 SKAP2O75563 359 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-204ENST00000376643 GCM2O75603 506 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-204ENST00000376643 NTN1O95631 604 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 NID1P14543 1247 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 PGCP20142 388 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 MATN1P21941 496 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 IDUAP35475 653 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 CLDN8P56748 225 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 EMX2Q04743 252 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 QPRTQ15274 297 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 DPY19L1Q2PZI1 675 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 NCMAPQ5T1S8 102 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 CBLN3Q6UW01 205 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 DNAJC14Q6Y2X3 702 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-204ENST00000376643 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 EIF3MQ7L2H7 374 aaKnown RBP13.12□□□□□ -0.31
HDAC6-204ENST00000376643 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 RADILQ96JH8 1075 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 SLC35G5Q96KT7 338 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 SDF2Q99470 211 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 NPAS1Q99742 590 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 MECRQ9BV79 373 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 ALG2Q9H553 416 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 LAMP3Q9UQV4 416 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 SLC35A3Q9Y2D2 325 aa13.12□□□□□ -0.31
HDAC6-204ENST00000376643 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-204ENST00000376643 A0A1W2PP18 115 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 CLOCKO15516 846 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 ADAP00813 363 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 CSTAP01040 98 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 BPGMP07738 259 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 OR3A2P47893 321 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
HDAC6-204ENST00000376643 TXNL4AP83876 142 aaKnown RBP13.11□□□□□ -0.31
HDAC6-204ENST00000376643 HPCAP84074 193 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 RASGEF1BQ0VAM2 473 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF141Q15928 474 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDAC6-204ENST00000376643 ALKBH2Q6NS38 261 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 EMBQ6PCB8 327 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 BHLHA15Q7RTS1 189 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-204ENST00000376643 GALNT5Q7Z7M9 940 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 RIMKLAQ8IXN7 391 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 CIARTQ8N365 385 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-204ENST00000376643 ATP6V1C2Q8NEY4 427 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 COQ10BQ9H8M1 238 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 SLC17A7Q9P2U7 560 aa13.11□□□□□ -0.31
HDAC6-204ENST00000376643 PCNX3Q9H6A9 2034 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 NPIPA5A0A0B4J1W7 369 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 RNF103-CHMP3A0A140T963 221 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 NPIPA7E9PJI5 369 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 GPR171O14626 319 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 DNPH1O43598 174 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 CYTIPO60759 359 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 SPAG7O75391 227 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 TP53P04637 393 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 MYZAPP0CAP1 466 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 NPIPA8P0DM63 369 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 G6PDP11413 515 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 PCSK6P29122 969 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 SHC1P29353 583 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 APOBEC1P41238 236 aaKnown RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 CLNS1AP54105 237 aaKnown RBP13.1□□□□□ -0.31
HDAC6-204ENST00000376643 HBA1P69905 142 aa13.1□□□□□ -0.31
HDAC6-204ENST00000376643 ZNF844Q08AG5 666 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms