RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ZBTB11O95625 1053 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 OXSR1O95747 527 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 FADS2O95864 444 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 ADAP00813 363 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 OPN1SWP03999 348 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 APODP05090 189 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CDK1P06493 297 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CA3P07451 260 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 TFPTP0C1Z6 253 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 PIPP12273 146 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 TNFRSF1BP20333 461 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 PSMB9P28065 219 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 UGT2B10P36537 528 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 TSFMP43897 325 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 MAP2K4P45985 399 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SERPINB10P48595 397 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CLCNKAP51800 687 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MLLT10P55197 1068 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 YPEL5P62699 121 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 RPS21P63220 83 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 CSNK1G2P78368 415 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ABATP80404 500 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 PRDX1Q06830 199 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 IRF3Q14653 427 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 IRF4Q15306 451 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MAPK11Q15759 364 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ZIC1Q15915 447 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 DGUOKQ16854 277 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ADPRMQ3LIE5 342 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ANKDD1AQ495B1 522 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 FBXO43Q4G163 708 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 TMEM35AQ53FP2 167 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 TOR1AIP1Q5JTV8 583 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 C1QTNF12Q5T7M4 302 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ZNF776Q68DI1 518 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 ZNF770Q6IQ21 691 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 LIN54Q6MZP7 749 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 DUS1LQ6P1R4 473 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 CEACAM20Q6UY09 585 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 AHSA2Q719I0 299 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 C6orf120Q7Z4R8 191 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 GATAD2AQ86YP4 633 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 P3H2Q8IVL5 708 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CPOQ8IVL8 374 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SAMD14Q8IZD0 417 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 HORMAD2Q8N7B1 307 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 LMNTD1Q8N9Z9 388 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 LINC01555Q8NAE3 123 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MINDY2Q8NBR6 621 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 OR5AK3PQ8NH89 298 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SUN3Q8TAQ9 357 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 DYNC2LI1Q8TCX1 351 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SFXN5Q8TD22 340 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CREB3L4Q8TEY5 395 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CHPT1Q8WUD6 406 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 RASSF5Q8WWW0 418 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 IGFBPL1Q8WX77 278 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 RSC1A1Q92681 617 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 HTRA1Q92743 480 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MYDGFQ969H8 173 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SLC38A4Q969I6 547 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MOAP1Q96BY2 351 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ZBED6CLQ96FA7 236 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 TMEM19Q96HH6 336 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 DACH2Q96NX9 599 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 COL21A1Q96P44 957 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 F2RL3Q96RI0 385 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CDCA3Q99618 268 aaPredicted RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 RHNO1Q9BSD3 238 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 COPS4Q9BT78 406 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ITPAQ9BY32 194 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 NUAK2Q9H093 628 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SLC25A32Q9H2D1 315 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 MVB12BQ9H7P6 319 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ZNF556Q9HAH1 456 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 HMG20AQ9NP66 347 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 IRAK4Q9NWZ3 460 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ZNF226Q9NYT6 803 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 CNOT2Q9NZN8 540 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 ACAD8Q9UKU7 415 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 RAB23Q9ULC3 237 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ERGIC3Q9Y282 383 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 SLC17A4Q9Y2C5 497 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 TDRKHQ9Y2W6 561 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 FAM32AQ9Y421 112 aaKnown RBP4.44□□□□□ -1.7
USP48-202ENST00000374730 STON1Q9Y6Q2 735 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 A3GALT2U3KPV4 340 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 FANCMQ8IYD8 2048 aa4.44□□□□□ -1.7
USP48-202ENST00000374730 ATG2BQ96BY7 2078 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 IGKV1-8A0A0C4DH67 115 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 LRIT2A6NDA9 550 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TMEM247A6NEH6 219 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 EFCAB10A6NFE3 127 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 J3KTA2 159 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 M0R3G1 203 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 RTCAO00442 366 aaKnown RBP4.43□□□□□ -1.7
USP48-202ENST00000374730 HMGN4O00479 90 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 FAAHO00519 579 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms