RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 PTCRAQ6ISU1 281 aaPredicted RBP11.87□□□□□ -0.51
GPC3-201ENST00000370818 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 CASP12Q6UXS9 341 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 BCDIN3DQ7Z5W3 292 aaKnown RBP11.87□□□□□ -0.51
GPC3-201ENST00000370818 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
GPC3-201ENST00000370818 NKAIN4Q8IVV8 208 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 TCEANCQ8N8B7 351 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 ZNF680Q8NEM1 530 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 OR8J1Q8NGP2 316 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 C1orf216Q8TAB5 229 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 NR4A3Q92570 626 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 HLA-CQ95604 372 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 CRELD1Q96HD1 420 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 OR5M11Q96RB7 305 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 STACQ99469 402 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 CNPPD1Q9BV87 410 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 ASPNQ9BXN1 380 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 SAP130Q9H0E3 1048 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 UCK1Q9HA47 277 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 U3KQ87 197 aa11.87□□□□□ -0.51
GPC3-201ENST00000370818 LAMA1P25391 3075 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 LILRA5A6NI73 299 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 TGFBR3LH3BV60 316 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 PRKYO43930 277 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 CBX7O95931 251 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 SLC35E2P0CK97 266 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 PIPP12273 146 aaPredicted RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZNF136P52737 540 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 EFNB1P98172 346 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 CDK5Q00535 292 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 DBPQ10586 325 aaPredicted RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 DOC2BQ14184 412 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 LARS2Q15031 903 aaKnown RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 TSTQ16762 297 aaKnown RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 TIMM50Q3ZCQ8 353 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 PLAG1Q6DJT9 500 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ACSM5Q6NUN0 579 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZNF782Q6ZMW2 699 aaPredicted RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 GJD3Q8N144 294 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 HYLS1Q96M11 299 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 SLC38A3Q99624 504 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 MCHR1Q99705 422 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ANKRD19PQ9H560 264 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZNF224Q9NZL3 707 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 VCANP13611 3396 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 STX11O75558 287 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 IFI6P09912 130 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 S1PR1P21453 382 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 OMPP47874 163 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 GABRA4P48169 554 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ETV1P50549 477 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 GFERP55789 205 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 MAB21L1Q13394 359 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 GINS1Q14691 196 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 AANATQ16613 207 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZCCHC12Q6PEW1 402 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 PLET1Q6UQ28 207 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 FAM131AQ6UXB0 335 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZNF730Q6ZMV8 503 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 GLCCI1Q86VQ1 547 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZNF619Q8N2I2 560 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 COX18Q8N8Q8 333 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 ENKURQ8TC29 256 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 FGF11Q92914 225 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 TCTN2Q96GX1 697 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 HSPA12BQ96MM6 686 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 GPR137Q96N19 417 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 MGLLQ99685 303 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 PCED1AQ9H1Q7 454 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 EGLN3Q9H6Z9 239 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 TRIM45Q9H8W5 580 aaPredicted RBP11.86□□□□□ -0.51
GPC3-201ENST00000370818 ZNF304Q9HCX3 659 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 TVP23BQ9NYZ1 205 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 CNIH4Q9P003 139 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 HCN3Q9P1Z3 774 aa11.86□□□□□ -0.51
GPC3-201ENST00000370818 NPIPA5A0A0B4J1W7 369 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 NPIPA7E9PJI5 369 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 PEX12O00623 359 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 SERPINI2O75830 405 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 THBS1P07996 1170 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 NPIPA8P0DM63 369 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 PRG2P13727 222 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 GSTM3P21266 225 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 TGM4P49221 684 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 SSX1Q16384 188 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 GDF7Q7Z4P5 450 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 CAMKK1Q8N5S9 505 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 SLC41A3Q96GZ6 507 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 FAM46AQ96IP4 442 aaKnown RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 ZNF578Q96N58 590 aaPredicted RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 ZNF285Q96NJ3 590 aa11.85□□□□□ -0.51
GPC3-201ENST00000370818 PPIL3Q9H2H8 161 aaKnown RBP11.85□□□□□ -0.51
GPC3-201ENST00000370818 MCUBQ9NWR8 336 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms