RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GPR143P51810 404 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 ATP12AP54707 1039 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 CDC20Q12834 499 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 GPR50Q13585 617 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 PERM1Q5SV97 790 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 ULK3Q6PHR2 472 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 HSDL2Q6YN16 418 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 CCDC190Q86UF4 302 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 SLITRK4Q8IW52 837 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 RNF217Q8TC41 542 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 DNAJA4Q8WW22 397 aaPredicted RBP12.94□□□□□ -0.34
USF1-202ENST00000368020 MMABQ96EY8 250 aaPredicted RBP12.94□□□□□ -0.34
USF1-202ENST00000368020 OR1F2PQ96R84 312 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 SLC30A2Q9BRI3 323 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 ZNF426Q9BUY5 554 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 DPH1Q9BZG8 443 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 SYNDIG1Q9H7V2 258 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 SMURF1Q9HCE7 757 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 FBXO34Q9NWN3 711 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 DNAJB12Q9NXW2 375 aaKnown RBP12.94□□□□□ -0.34
USF1-202ENST00000368020 CBLCQ9ULV8 474 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 SLC35A3Q9Y2D2 325 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 CAB39Q9Y376 341 aaPredicted RBP12.94□□□□□ -0.34
USF1-202ENST00000368020 TP53BP1Q12888 1972 aaPredicted RBP12.94□□□□□ -0.34
USF1-202ENST00000368020 NPIPB9F8W1W9 429 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 CH25HO95992 272 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 PTTG1O95997 202 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 IFNGP01579 166 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 SAGP10523 405 aaPredicted RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 TGM1P22735 817 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 POU4F2Q12837 409 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 ZNF267Q14586 743 aaPredicted RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 SOWAHCQ53LP3 525 aaPredicted RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 ARHGAP11AQ6P4F7 1023 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 RTL4Q6ZR62 310 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 MEX3DQ86XN8 651 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 PARP16Q8N5Y8 322 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 ZNF614Q8N883 585 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 ZNF527Q8NB42 609 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 SLC2A12Q8TD20 617 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 PIGKQ92643 395 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 SLC25A46Q96AG3 418 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 WDFY2Q96P53 400 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 RNF167Q9H6Y7 350 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 MRTO4Q9UKD2 239 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 SIGLEC7Q9Y286 467 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 OR10H1Q9Y4A9 318 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 NPIPA5A0A0B4J1W7 369 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 A0A1B0GVT2 93 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 NPIPA7E9PJI5 369 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 POLR1CO15160 346 aaPredicted RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 PPM1BO75688 479 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 NPIPA8P0DM63 369 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 ZNF3P17036 446 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 TBXA2RP21731 343 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 LCN1P31025 176 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 SLC6A6P31641 620 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 SLC9A3P48764 834 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 ALG10BQ5I7T1 473 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 CD200R1LQ6Q8B3 271 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 PAQR6Q6TCH4 344 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 QSOX2Q6ZRP7 698 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 MEPCEQ7L2J0 689 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 LYSMD2Q8IV50 215 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 OR51Q1Q8NH59 317 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 OR4C6Q8NH72 309 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 AHCYL2Q96HN2 611 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 TGM7Q96PF1 710 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 OR10A5Q9H207 317 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 ERVK13-1Q9NX77 482 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 TRAPPC4Q9Y296 219 aa12.93□□□□□ -0.34
USF1-202ENST00000368020 ARID1BQ8NFD5 2236 aaPredicted RBP12.93□□□□□ -0.34
USF1-202ENST00000368020 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 TMEM150CB9EJG8 249 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 PRR23D1E9PI22 279 aaPredicted RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 IGF2P01344 180 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 IFNA16P05015 189 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 ZGLP1P0C6A0 271 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 PRR23D2P0DMB1 279 aaPredicted RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 CD53P19397 219 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 MAKP20794 623 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 CFL1P23528 166 aaKnown RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 SSTR4P31391 388 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 RPS19P39019 145 aaKnown RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 ACAA2P42765 397 aaKnown RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 ARRB1P49407 418 aaPredicted RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 YOD1Q5VVQ6 348 aaPredicted RBP12.92□□□□□ -0.34
USF1-202ENST00000368020 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
USF1-202ENST00000368020 DGAT2L6Q6ZPD8 337 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms