RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 SOCS6O14544 535 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 SLC2A10O95528 541 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 STATHP02808 62 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ARSBP15848 533 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 F8A1P23610 371 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 CERS1P27544 350 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 PDX1P52945 283 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 C19orf57Q0VDD7 668 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 EIF2B5Q13144 721 aaKnown RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 MAB21L1Q13394 359 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 TRAM1Q15629 374 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 HBMQ6B0K9 141 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 CDC73Q6P1J9 531 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 SMARCD3Q6STE5 483 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 FRRS1Q6ZNA5 592 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 LRRC28Q86X40 367 aaPredicted RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 FAM20CQ8IXL6 584 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 RNF113BQ8IZP6 322 aaKnown RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 ZBTB44Q8NCP5 570 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 TMEM255BQ8WV15 326 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 DEDD2Q8WXF8 326 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 UPRTQ96BW1 309 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ZC3H10Q96K80 434 aaKnown RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 OSGEPL1Q9H4B0 414 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 CACYBPQ9HB71 228 aaKnown RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 KCNK6Q9Y257 313 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ZNF443Q9Y2A4 671 aaPredicted RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 NTNG1Q9Y2I2 539 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 UNC119BA6NIH7 251 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 NOTOA8MTQ0 251 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ISM1B1AKI9 464 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 CMPK1P30085 196 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 SLC6A1P30531 599 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ATP12AP54707 1039 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 RAB8AP61006 207 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 INSL4Q14641 139 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ARHGAP11BQ3KRB8 267 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ZNF57Q68EA5 555 aaPredicted RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 MFSD12Q6NUT3 480 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 CREB3L2Q70SY1 520 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 TPRA1Q86W33 373 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 SAMD14Q8IZD0 417 aaPredicted RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 KAT2AQ92830 837 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 TIMP4Q99727 224 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 TMEM168Q9H0V1 697 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 ISG20L2Q9H9L3 353 aaKnown RBP11.5□□□□□ -0.57
UBA3-202ENST00000361055 INPP5EQ9NRR6 644 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 EXTL2Q9UBQ6 330 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 PLEKHM1Q9Y4G2 1056 aa11.5□□□□□ -0.57
UBA3-202ENST00000361055 LOC102723532A0A0G2JNH3 316 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 FAM86C2PA6NEL3 165 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 C12orf71A8MTZ7 269 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 SCAMP1O15126 338 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
UBA3-202ENST00000361055 HK1P19367 917 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 PAICSP22234 425 aaKnown RBP11.49□□□□□ -0.57
UBA3-202ENST00000361055 NUBP1P53384 320 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 NXPH1P58417 271 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 DUSP8Q13202 625 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 GALEQ14376 348 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 IDNKQ5T6J7 187 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 HACD4Q5VWC8 232 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 ZNF425Q6IV72 752 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 ZNF767PQ75MW2 155 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 SIRT6Q8N6T7 355 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 SLC16A11Q8NCK7 471 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 OR51G2Q8NGK0 314 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 AKAP1Q92667 903 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBA3-202ENST00000361055 C10orf90Q96M02 699 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 FCRL4Q96PJ5 515 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 THAP7Q9BT49 309 aaPredicted RBP11.49□□□□□ -0.57
UBA3-202ENST00000361055 WACQ9BTA9 647 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 MRPL39Q9NYK5 338 aaKnown RBP11.49□□□□□ -0.57
UBA3-202ENST00000361055 SUSD2Q9UGT4 822 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 SLC7A7Q9UM01 511 aa11.49□□□□□ -0.57
UBA3-202ENST00000361055 SIRT4Q9Y6E7 314 aaPredicted RBP11.49□□□□□ -0.57
UBA3-202ENST00000361055 A0A0G2JMP0 313 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 A0A0X1KG70 313 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 PRR33A8MZF0 331 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 PIP5K1CO60331 668 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 OR2B3O76000 313 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 THBS1P07996 1170 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 ZGLP1P0C6A0 271 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
UBA3-202ENST00000361055 TALDO1P37837 337 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 GCGRP47871 477 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 CSNK1EP49674 416 aaKnown RBP11.48□□□□□ -0.57
UBA3-202ENST00000361055 ZNF136P52737 540 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 BTN3A2P78410 334 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 ILF3Q12906 894 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBA3-202ENST00000361055 MRPL28Q13084 256 aaKnown RBP11.48□□□□□ -0.57
UBA3-202ENST00000361055 GPR176Q14439 515 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 EIPR1Q53HC9 387 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 NIPAL3Q6P499 406 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 PLBD1Q6P4A8 553 aa11.48□□□□□ -0.57
UBA3-202ENST00000361055 OAFQ86UD1 273 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms