RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MLLT11Q13015 90 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 DUSP8Q13202 625 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF385CQ66K41 422 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 LCN10Q6JVE6 187 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 PRSS58Q8IYP2 241 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 OR8H2Q8N162 312 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 NANOGP1Q8N7R0 232 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 COX18Q8N8Q8 333 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 TSLPQ969D9 159 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 STACQ99469 402 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 HOXD1Q9GZZ0 328 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 DUSP22Q9NRW4 184 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 PNO1Q9NRX1 252 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 MKL2Q9ULH7 1088 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 C17orf105B2RV13 164 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 CPNE3O75131 537 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 CSO75390 466 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 RFPL3O75679 317 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 UGT2B17O75795 530 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 CBX7O95931 251 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 AK1P00568 194 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 ACP2P11117 423 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 S1PR1P21453 382 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 RPS19P39019 145 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 NSDHLQ15738 373 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 DUSP5Q16690 384 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF544Q6NX49 715 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 PGBD2Q6P3X8 592 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 TCEANCQ8N8B7 351 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 VANGL1Q8TAA9 524 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 GPR151Q8TDV0 419 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 AGAP4Q96P64 663 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 TSSK6Q9BXA6 273 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 C14orf105Q9NVL8 296 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 DNAJC27Q9NZQ0 273 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 ACAD8Q9UKU7 415 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 CAB39Q9Y376 341 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 CLCA3PQ9Y6N3 262 aa12.16□□□□□ -0.46
SQSTM1-201ENST00000360718 IRGMA1A4Y4 181 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF670-ZNF695F2Z2N8 137 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 SOX14O95416 240 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 CHRM4P08173 479 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 ADRA2AP08913 450 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 GSTT2P0CG29 244 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 GSTT2BP0CG30 244 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 ZNF91Q05481 1191 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 SEC23BQ15437 767 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 CARTPTQ16568 116 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 ARHGAP11BQ3KRB8 267 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC25A30Q5SVS4 291 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 CD300LDQ6UXZ3 194 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 TMPRSS11AQ6ZMR5 421 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 FAM26EQ8N5C1 309 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 FNDC11Q9BVV2 318 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 POLDIP3Q9BY77 421 aaKnown RBP12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 POU2F3Q9UKI9 436 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 ERVK-19Q9WJR5 959 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 SLC9A8Q9Y2E8 581 aa12.15□□□□□ -0.46
SQSTM1-201ENST00000360718 IGKV3D-11A0A0A0MRZ8 115 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 A0A1W2PRQ8 180 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SNTNA6NMZ2 147 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 CCNKO75909 580 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ALPPP05187 535 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SSTR4P31391 388 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 GABRA3P34903 492 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 OR2B6P58173 313 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ELAVL1Q15717 326 aaKnown RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 KLHL22Q53GT1 634 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SHISA6Q6ZSJ9 500 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 OR7G1Q8NGA0 311 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 WDFY2Q96P53 400 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 NDUFB11Q9NX14 153 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ERVK13-1Q9NX77 482 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SLC39A1Q9NY26 324 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 PRODH2Q9UF12 536 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SATB2Q9UPW6 733 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 WDR45Q9Y484 360 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 KNTC1P50748 2209 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 IGLV3-12A0A075B6K2 115 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SLC35F4A4IF30 521 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 RAB36O95755 333 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 KLK3P07288 261 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ZGLP1P0C6A0 271 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 RORAP35398 523 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ETV5P41161 510 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 SOX3P41225 446 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 CRYBB2P43320 205 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 POU6F2P78424 691 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 FUT7Q11130 342 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
SQSTM1-201ENST00000360718 RSBN1Q5VWQ0 802 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms