RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 MRM1Q6IN84 353 aaKnown RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 PLCZ1Q86YW0 608 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 BMPERQ8N8U9 685 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 OR4K14Q8NGD5 310 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 OR2L8Q8NGY9 312 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 OR4C6Q8NH72 309 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 GHSRQ92847 366 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 ZNF707Q96C28 371 aaPredicted RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 BPIFA2Q96DR5 249 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 GIMAP5Q96F15 307 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 SDF2Q99470 211 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 TEAD3Q99594 435 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 SOSTQ9BQB4 213 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 GPR174Q9BXC1 333 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 LRRN3Q9H3W5 708 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 ISYNA1Q9NPH2 558 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 STON1Q9Y6Q2 735 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 H0Y8X5 98 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 MT-ND5P03915 603 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 FAM157BP0CG42 384 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 POLR2CP19387 275 aaPredicted RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 PRKAR1BP31321 381 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 FGFBP1Q14512 234 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 POU4F3Q15319 338 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 GJD3Q8N144 294 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 SLC44A3Q8N4M1 653 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 FAM98AQ8NCA5 519 aaKnown RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 SDR9C7Q8NEX9 313 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 FGF13Q92913 245 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 TSACCQ96A04 125 aaPredicted RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 PEX11GQ96HA9 241 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 TNFRSF13CQ96RJ3 184 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 DPCDQ9BVM2 203 aaPredicted RBP11.26□□□□□ -0.61
CLIP3-201ENST00000360535 C1QTNF2Q9BXJ5 285 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 NT5DC2Q9H857 520 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 ING4Q9UNL4 249 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 POLHQ9Y253 713 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
CLIP3-201ENST00000360535 DUXAA6NLW8 204 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CACNB4O00305 520 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 SEC14L5O43304 696 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ICMTO60725 284 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 IGHA1P01876 353 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CEACAM5P06731 702 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 GABRA3P34903 492 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 PDGFRLQ15198 375 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 GAB4Q2WGN9 574 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 BICRALQ6AI39 1079 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 TANGO2Q6ICL3 276 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 METAP1DQ6UB28 335 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 LRRC28Q86X40 367 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 SIAH3Q8IW03 269 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ZNF655Q8N720 491 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 SRFBP1Q8NEF9 429 aaKnown RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 SMPDL3BQ92485 455 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CACNG6Q9BXT2 260 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 IGFLR1Q9H665 355 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 KRCC1Q9NPI7 259 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ASB6Q9NWX5 421 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CLDND1Q9NY35 253 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 TBC1D29Q9UFV1 150 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 EXOGQ9Y2C4 368 aaKnown RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 TRAPPC13A5PLN9 417 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 RIIAD1A6NNX1 92 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 PRKNO60260 465 aaPredicted RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CRYZL1O95825 349 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 BMP8BP34820 402 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CLDN12P56749 244 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ERVK-21P61565 698 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 RGS1Q08116 209 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ENPP7Q6UWV6 458 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 BMP8AQ7Z5Y6 402 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 MRGPREQ86SM8 312 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 OR11H7Q8NGC8 314 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 OR52E2Q8NGJ4 325 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 MS4A4EQ96PG1 132 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 KCNJ15Q99712 375 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 PDCD1LG2Q9BQ51 273 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 SRMSQ9H3Y6 488 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 FGF22Q9HCT0 170 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 TDRD6O60522 2096 aaKnown RBP11.25□□□□□ -0.61
CLIP3-201ENST00000360535 GXYLT2A0PJZ3 443 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ANKRD61A6NGH8 418 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 IMPA2O14732 288 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 CHP2O43745 196 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 RFPL3O75679 317 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 PTHLHP12272 177 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 AHCYP23526 432 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 STOMP27105 288 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 VEGFBP49765 207 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ZNF136P52737 540 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 RUNX2Q13950 521 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 VN1R4Q7Z5H5 301 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ZAR1Q86SH2 424 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 OAFQ86UD1 273 aa11.25□□□□□ -0.61
CLIP3-201ENST00000360535 ZNF761Q86XN6 746 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms