RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 OARD1Q9Y530 152 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 A0A0B4J2A0 478 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 GAPDHSO14556 408 aaPredicted RBP12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 TGOLN2O43493 480 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 SYT7O43581 403 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 SIX6O95475 246 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 HBE1P02100 147 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 HSD17B1P14061 328 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 CPN1P15169 458 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 CCDC116Q8IYX3 515 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 OR10Z1Q8NGY1 313 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 SHPKQ9UHJ6 478 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 A0A1W2PRU2 124 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 KDELR3O43731 214 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 DGKZQ13574 1117 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 DUSP7Q16829 419 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 METTL2BQ6P1Q9 378 aaKnown RBP12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 C14orf80Q86SX3 495 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 CNTN4Q8IWV2 1026 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 RHEBL1Q8TAI7 183 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 URGCP-MRPS24S4R325 110 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 HEATR5BQ9P2D3 2071 aa12.47□□□□□ -0.41
SRGAP3-201ENST00000360413 CDHR4A6H8M9 788 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 TNFSF8P32971 234 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 SLC25A11Q02978 314 aaKnown RBP12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 NSDHLQ15738 373 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 PRRT3Q5FWE3 981 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 SULF2Q8IWU5 870 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 OR11L1Q8NGX0 322 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 PRR11Q96HE9 360 aaPredicted RBP12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 RALGAPA1Q6GYQ0 2036 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 CPNE6O95741 557 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 LMO2P25791 158 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 ECI1P42126 302 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 STC1P52823 247 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 NXPE4Q6UWF7 544 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 KCNK13Q9HB14 408 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 KCNQ1P51787 676 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 GDF6Q6KF10 455 aaPredicted RBP12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 TRMT2BQ96GJ1 504 aaKnown RBP12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 CACFD1Q9UGQ2 172 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 MEGF6O75095 1541 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 NFAT5O94916 1531 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 ADH4P08319 380 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 TXNRD3NBQ6F5E7 133 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 C22orf39Q6P5X5 142 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 HHIPL1Q96JK4 782 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 SPATA6Q9NWH7 488 aaPredicted RBP12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
SRGAP3-201ENST00000360413 A6NIN4 97 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 FABP7O15540 132 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 PTBP3O95758 552 aaKnown RBP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 TMEM225BP0DP42 221 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 OSMP13725 252 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 NPBWR1P48145 328 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 CRYZQ08257 329 aaKnown RBP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 RNF141Q8WVD5 230 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 NSUN5Q96P11 429 aaKnown RBP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 THSD1Q9NS62 852 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 ASH2LQ9UBL3 628 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 SCN3AQ9NY46 2000 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF487B1APH4 448 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 HTR3BO95264 441 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 ARSBP15848 533 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 MICAQ29983 383 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 MPEG1Q2M385 716 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 VASNQ6EMK4 673 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 CD163Q86VB7 1156 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 SIAH1Q8IUQ4 282 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 OR4M1Q8NGD0 313 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 FAM213BQ8TBF2 198 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 TFAP2CQ92754 450 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 ATF6BQ99941 703 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 APOBEC3GQ9HC16 384 aaKnown RBP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 FBXL2Q9UKC9 423 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 SLIT3O75094 1523 aa12.46□□□□□ -0.42
SRGAP3-201ENST00000360413 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 ARHGAP11BQ3KRB8 267 aa12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC46A3Q7Z3Q1 461 aa12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 FAM174AQ8TBP5 190 aa12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 M1APQ8TC57 530 aa12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC35A3Q9Y2D2 325 aa12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 LRRC30A6NM36 301 aa12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 PRSS55Q6UWB4 352 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC5A8Q8N695 610 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms