RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 IFNGP01579 166 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 CTSBP07858 339 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 THEGLP0DJG4 465 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ANGPT1Q15389 498 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 HES5Q5TA89 166 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 SFRP4Q6FHJ7 346 aaPredicted RBP11.3□□□□□ -0.6
SIRPA-201ENST00000356025 OR5M10Q6IEU7 315 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 FAM26EQ8N5C1 309 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 LRRC17Q8N6Y2 441 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 OR6C4Q8NGE1 309 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 HHIPQ96QV1 700 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 MAN2C1Q9NTJ4 1040 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 MYEF2Q9P2K5 600 aaKnown RBP11.3□□□□□ -0.6
SIRPA-201ENST00000356025 CHST2Q9Y4C5 530 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 SNRNP200O75643 2136 aaKnown RBP11.3□□□□□ -0.6
SIRPA-201ENST00000356025 ABCA7Q8IZY2 2146 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 SDK2Q58EX2 2172 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 A0A0G2JMP0 313 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 A0A0X1KG70 313 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 IQCMA0A1B0GVH7 501 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 TVP23AA6NH52 213 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 CASC3O15234 703 aaKnown RBP11.3□□□□□ -0.6
SIRPA-201ENST00000356025 MAOAP21397 527 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 GNG2P59768 71 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 SQSTM1Q13501 440 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 TATDN3Q17R31 274 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 PLK5Q496M5 336 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 KIAA0907Q7Z7F0 614 aaPredicted RBP11.3□□□□□ -0.6
SIRPA-201ENST00000356025 GJD3Q8N144 294 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 OR4M2Q8NGB6 313 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 OR5W2Q8NH69 310 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 RIT1Q92963 219 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 KCNN2Q9H2S1 579 aa11.3□□□□□ -0.6
SIRPA-201ENST00000356025 CACNA1EQ15878 2313 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
SIRPA-201ENST00000356025 MAKP20794 623 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 HNRNPA2B1P22626 353 aaKnown RBP11.29□□□□□ -0.6
SIRPA-201ENST00000356025 NDUFS1P28331 727 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 UQCRC1P31930 480 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 TNFRSF17Q02223 184 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 C1orf189Q5VU69 101 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 HLA-DQA1Q5Y7H0 255 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 C1orf94Q6P1W5 598 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 NOXA1Q86UR1 476 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 GALNT9Q9HCQ5 603 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 ZNF346Q9UL40 294 aaKnown RBP11.29□□□□□ -0.6
SIRPA-201ENST00000356025 ATXN7L1Q9ULK2 861 aaPredicted RBP11.29□□□□□ -0.6
SIRPA-201ENST00000356025 DAPP1Q9UN19 280 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 CDH10Q9Y6N8 788 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 C2orf74A8MZ97 194 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 CHURC1-FNTBB4DL54 471 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 MT-ND5P03915 603 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 F13BP05160 661 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 C21orf58P58505 322 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 BTG2P78543 158 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 ELOAQ14241 798 aaKnown RBP11.29□□□□□ -0.6
SIRPA-201ENST00000356025 C12orf73Q69YU5 71 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 FGD2Q7Z6J4 655 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 OR8H3Q8N146 312 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 LINC00471Q8N535 108 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 YIPF7Q8N8F6 280 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 SLC37A2Q8TED4 501 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 MSLNLQ96KJ4 702 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 DGAT2Q96PD7 388 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 TSSK2Q96PF2 358 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 OR2A14Q96R47 310 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 PDCD1LG2Q9BQ51 273 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 TAPBPLQ9BX59 468 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 C1QTNF2Q9BXJ5 285 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 LYRM1O43325 122 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 SEMA4FO95754 770 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 CSF3P09919 207 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 MYF5P13349 255 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 STAT5AP42229 794 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 OR1D4P47884 311 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 E2F1Q01094 437 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 CDC20Q12834 499 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 PRAMEF17Q5VTA0 474 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 PRSS45Q7RTY3 260 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 CCDC190Q86UF4 302 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 UBQLNLQ8IYU4 475 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 SLC25A46Q96AG3 418 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 ELF4Q99607 663 aaPredicted RBP11.29□□□□□ -0.6
SIRPA-201ENST00000356025 MED28Q9H204 178 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 RNF121Q9H920 327 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 NDUFB11Q9NX14 153 aa11.29□□□□□ -0.6
SIRPA-201ENST00000356025 ADAM29Q9UKF5 820 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms