RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 AGXTP21549 392 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 CDK9P50750 372 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ALDH3A2P51648 485 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 XKP51811 444 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ARHGDIAP52565 204 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 SELENOWP63302 87 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 PLIN5Q00G26 463 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 Q0VFX4 171 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 RUNX2Q13950 521 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 IFI44LQ53G44 452 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 CYBRD1Q53TN4 286 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF628Q5EBL2 1059 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ATAD3BQ5T9A4 648 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 C18orf63Q68DL7 685 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 HEPHL1Q6MZM0 1159 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ANGPTL8Q6UXH0 198 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ZBTB49Q6ZSB9 765 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 C6orf120Q7Z4R8 191 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 HIPK1Q86Z02 1210 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 TGIF2LYQ8IUE0 185 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 GPR135Q8IZ08 494 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 MARVELD2Q8N4S9 558 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 AMER3Q8N944 861 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 CDRT4Q8N9R6 151 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ACBD4Q8NC06 268 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 TOR1AIP2Q8NFQ8 470 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 OR2Y1Q8NGV0 311 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ZCCHC10Q8TBK6 192 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 LRTOMTQ8WZ04 291 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 SLC35B4Q969S0 331 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 CTHRC1Q96CG8 243 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ELP4Q96EB1 424 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 RBM4BQ9BQ04 359 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 PSD2Q9BQI7 771 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF747Q9BV97 191 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 RBM4Q9BWF3 364 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ACTRT3Q9BYD9 372 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ANKRD60Q9BZ19 345 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 SLC7A5P2Q9GIP4 190 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 POLR2J2Q9GZM3 115 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 POLR2J3Q9H1A7 115 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 EXD2Q9NVH0 621 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 DDX18Q9NVP1 670 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 ENOPH1Q9UHY7 261 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 FBXW2Q9UKT8 454 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 C19orf53Q9UNZ5 99 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 KLHL20Q9Y2M5 609 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 PTRH2Q9Y3E5 179 aaKnown RBP6.39□□□□□ -1.39
VPS13A-201ENST00000355766 SNX8Q9Y5X2 465 aa6.39□□□□□ -1.39
VPS13A-201ENST00000355766 A0A0G2JPF8 293 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 A0A1B0GX78 115 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 HNRNPCL2B2RXH8 293 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 HNRNPCL3B7ZW38 293 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 DSCR3O14972 297 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 PGRMC2O15173 223 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CHST10O43529 356 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 FOXS1O43638 330 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CTNSO60931 367 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 ALOX12BO75342 701 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 ERAL1O75616 437 aaKnown RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 TIPRLO75663 272 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 PGM3O95394 542 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CLDN14O95500 239 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CNOT4O95628 575 aaKnown RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 EIF2S1P05198 315 aaKnown RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 UMODP07911 640 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 HNRNPCL4P0DMR1 293 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 ETFAP13804 333 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CDH2P19022 906 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 FPR1P21462 350 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 LCN1P31025 176 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 MAN2A2P49641 1150 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SMSP52788 366 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CRYBA2P53672 197 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 AQP4P55087 323 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SMIM11AP58511 58 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 MRPS35P82673 323 aaKnown RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 HPCAP84074 193 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 IL18R1Q13478 541 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 MED21Q13503 144 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 LRRC23Q53EV4 343 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 AGAP7PQ5VUJ5 663 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 OR2T5Q6IEZ7 315 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 HMBOX1Q6NT76 420 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 MFSD12Q6NUT3 480 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 CDC73Q6P1J9 531 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SHQ1Q6PI26 577 aaKnown RBP6.38□□□□□ -1.39
VPS13A-201ENST00000355766 ENPP6Q6UWR7 440 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 QSOX2Q6ZRP7 698 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 ZDHHC21Q8IVQ6 265 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 C10orf111Q8N326 155 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 OR2T29Q8NH02 315 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 OR5K1Q8NHB7 308 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 SLC38A5Q8WUX1 472 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 AGAP4Q96P64 663 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 TAAR6Q96RI8 345 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 EPYCQ99645 322 aa6.38□□□□□ -1.39
VPS13A-201ENST00000355766 KCNJ15Q99712 375 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms