RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 PRAMEF8Q5VWM4 474 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 PRAMEF7Q5VXH5 474 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 SDE2Q6IQ49 451 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 ESPNLQ6ZVH7 1005 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 RANBP3LQ86VV4 465 aaPredicted RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 CADM2Q8N3J6 435 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 RSC1A1Q92681 617 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 SMIM10Q96HG1 83 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 FRMD6Q96NE9 622 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 TMEM246Q9BRR3 403 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 YIPF2Q9BWQ6 316 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 PIGUQ9H490 435 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 CACYBPQ9HB71 228 aaKnown RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 EXTL2Q9UBQ6 330 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 EXOGQ9Y2C4 368 aaKnown RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 EML5Q05BV3 1969 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 LYPD3O95274 346 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 EIF4EP06730 217 aaKnown RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 NDUFS1P28331 727 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 SRP9P49458 86 aaKnown RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 EVX1P49640 407 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 MAT1AQ00266 395 aaKnown RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 HYAL1Q12794 435 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 SLC25A35Q3KQZ1 300 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 LCN1P1Q5VSP4 162 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 USP53Q70EK8 1073 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 GDPD1Q8N9F7 314 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 SDR9C7Q8NEX9 313 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 OR13H1Q8NG92 308 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 OR52R1Q8NGF1 315 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 OR52L1Q8NGH7 329 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 OR5J2Q8NH18 312 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 SCARF2Q96GP6 870 aaPredicted RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 C4orf36Q96KX1 117 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 ZFYVE21Q9BQ24 234 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 HCN3Q9P1Z3 774 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 ZNF346Q9UL40 294 aaKnown RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 C19orf53Q9UNZ5 99 aaPredicted RBP13□□□□□ -0.33
PGBD2-202ENST00000355360 HEBP2Q9Y5Z4 205 aa13□□□□□ -0.33
PGBD2-202ENST00000355360 COQ9O75208 318 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 IGKV1D-16P01601 117 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 NID1P14543 1247 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 NAA10P41227 235 aaPredicted RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 MAGEB1P43366 347 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 TSFMP43897 325 aaKnown RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 MAP2K3P46734 347 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 AGFG1P52594 562 aaKnown RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 LBX1P52954 281 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 SRP54P61011 504 aaKnown RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 SNRPD2P62316 118 aaKnown RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 TP53I3Q53FA7 332 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 ZNRF4Q8WWF5 429 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 AP3S1Q92572 193 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 RERGQ96A58 199 aaPredicted RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 ZMYND19Q96E35 227 aaPredicted RBP12.99□□□□□ -0.33
PGBD2-202ENST00000355360 DEPDC7Q96QD5 511 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 TEAD3Q99594 435 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 MED18Q9BUE0 208 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 PHF11Q9UIL8 331 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 NOX1Q9Y5S8 564 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 ALG5Q9Y673 324 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 RP1P56715 2156 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 A0A087WV48 116 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 A6NCN8 305 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 GMFGO60234 142 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 GRPRP30550 384 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 CTHP32929 405 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 QPRTQ15274 297 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 PRICKLE4Q2TBC4 344 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 PLET1Q6UQ28 207 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 Q6ZSR6 202 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 RDH10Q8IZV5 341 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 SLC22A18ASQ8N1D0 253 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 SAMD12Q8N8I0 201 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 GATSQ8NAP1 163 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 NT5CQ8TCD5 201 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 HMGB4Q8WW32 186 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 GALNT9Q9HCQ5 603 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 SIGLEC7Q9Y286 467 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 ADAM18Q9Y3Q7 739 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 FAM240BA0A1B0GVZ2 78 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 OR6C70A6NIJ9 312 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 FAM171A2A8MVW0 826 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 J3QRE1 110 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 CYR61O00622 381 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 PYCR1P32322 319 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 TPMTP51580 245 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 PPP3R1P63098 170 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 SNAP47Q5SQN1 464 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 GJD3Q8N144 294 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 OR4K13Q8NH42 304 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 OR5W2Q8NH69 310 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 RPLP0P6Q8NHW5 317 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 GPR174Q9BXC1 333 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 TEX12Q9BXU0 123 aa12.99□□□□□ -0.33
PGBD2-202ENST00000355360 HDHD2Q9H0R4 259 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms