RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FGBP02675 491 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 STATHP02808 62 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ATP1B1P05026 303 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 RD3LP0DJH9 198 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 HOXB1P14653 301 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 HAAOP46952 286 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 VEGFBP49765 207 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 CTSCP53634 463 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ST3GAL3Q11203 375 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM69Q5SWH9 247 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 B3GNTL1Q67FW5 361 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 GDF6Q6KF10 455 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 FCRLAQ7L513 359 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ADCK2Q7Z695 626 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 NKAIN4Q8IVV8 208 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 OR1M1Q8NGA1 313 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 RGMAQ96B86 450 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 LRIG1Q96JA1 1093 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 MS4A4AQ96JQ5 239 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 EFCAB11Q9BUY7 163 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 TINAGL1Q9GZM7 467 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-201ENST00000352993 TREM1Q9NP99 234 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 SEMA4GQ9NTN9 838 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 C14orf105Q9NVL8 296 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 IL20Q9NYY1 176 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 ABRACLQ9P1F3 81 aa7.11□□□□□ -1.27
BRCA1-201ENST00000352993 KANTRA0A1W2PQU2 76 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 OR14I1A6ND48 311 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 ADAM11O75078 769 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 PAK4O96013 591 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SPP1P10451 314 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 RPL17P18621 184 aaKnown RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 NDUFV2P19404 249 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 RORAP35398 523 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SMCO1Q147U7 214 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CST9Q5W186 159 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 Q6ZVL8 140 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SVBPQ8N300 66 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CBARPQ8N350 705 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 FAM71CQ8NEG0 241 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 OR5J2Q8NH18 312 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 BRIX1Q8TDN6 353 aaKnown RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 TCEAL3Q969E4 200 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF285Q96NJ3 590 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 PTPN18Q99952 460 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 FN3KQ9H479 309 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 NEUROD4Q9HD90 331 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 NPDC1Q9NQX5 325 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 KLHL28Q9NXS3 571 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CXXC1Q9P0U4 656 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 B4GALT6Q9UBX8 382 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CACNA1CQ13936 2221 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CDHR4A6H8M9 788 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 TTLL8A6PVC2 850 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 H3BSH0 61 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 PYCARD-AS1I3L0S3 204 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SC5DO75845 299 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 ARL6IP5O75915 188 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 NFATC1O95644 943 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 HPP00738 406 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 EPXP11678 715 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 TYRP14679 529 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 FUT1P19526 365 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 LUMP51884 338 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 EPHA4P54764 986 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 PDE7AQ13946 482 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 MRPL58Q14197 206 aaKnown RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 MRPL10Q7Z7H8 261 aaKnown RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF546Q86UE3 836 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 VRK2Q86Y07 508 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 NAXDQ8IW45 347 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SPICQ8N5J4 248 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SFT2D1Q8WV19 159 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF480Q8WV37 535 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CPNE2Q96FN4 548 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-201ENST00000352993 IL17FQ96PD4 163 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 COA4Q9NYJ1 87 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 TAS2R5Q9NYW4 299 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 KLHL42Q9P2K6 505 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 PLAGL1Q9UM63 463 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 PCDHGA5Q9Y5G8 931 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CENPFP49454 3210 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 CASP8AP2Q9UKL3 1982 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 SPTBP11277 2137 aa7.1□□□□□ -1.27
BRCA1-201ENST00000352993 TRBV23-1A0A0A0MS06 115 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MEIS3P1A6NDR6 274 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 GALR3O60755 368 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 SAGP10523 405 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 NCBP2P52298 156 aaKnown RBP eCLIP7.09□□□□□ -1.275e-10■■■■■ 33.9
BRCA1-201ENST00000352993 HCCSP53701 268 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TAF13Q15543 124 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MAPK14Q16539 360 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 GUCA2BQ16661 112 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 PRSS55Q6UWB4 352 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 CD300LDQ6UXZ3 194 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 MEPCEQ7L2J0 689 aaKnown RBP7.09□□□□□ -1.27
BRCA1-201ENST00000352993 TMED4Q7Z7H5 227 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 GID4Q8IVV7 300 aa7.09□□□□□ -1.27
BRCA1-201ENST00000352993 OR51L1Q8NGJ5 315 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms