RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DPM1O60762 260 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CD8BP10966 210 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 RNH1P13489 461 aaKnown RBP12.86□□□□□ -0.35
TRIM4-201ENST00000349062 PAICSP22234 425 aaKnown RBP12.86□□□□□ -0.35
TRIM4-201ENST00000349062 GRPRP30550 384 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 IRF3Q14653 427 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 PRICKLE4Q2TBC4 344 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CEP78Q5JTW2 689 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 C1orf94Q6P1W5 598 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 BCL7BQ9BQE9 202 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF559Q9BR84 538 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR52D1Q9H346 318 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 HHATLQ9HCP6 504 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 POMT2Q9UKY4 750 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 ATXN7L1Q9ULK2 861 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-201ENST00000349062 DENND4AQ7Z401 1863 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 IGHV3-20A0A0C4DH32 117 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR5K4A6NMS3 321 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 SMLR1H3BR10 107 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CLDN4O14493 209 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 ADAM11O75078 769 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR2B3O76000 313 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 PPP1R3DO95685 299 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 SYT13Q7L8C5 426 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 LRRC17Q8N6Y2 441 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR52L1Q8NGH7 329 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR4C3Q8NH37 302 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR51Q1Q8NH59 317 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 TMEM239Q8WW34 195 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 FN3KQ9H479 309 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 TMEM27Q9HBJ8 222 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 A0A1B0GVC2 190 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 A0A1W2PQ09 198 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 A6NIN4 97 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 CBX7O95931 251 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 RPS19P39019 145 aaKnown RBP12.86□□□□□ -0.35
TRIM4-201ENST00000349062 DHPSP49366 369 aaPredicted RBP12.86□□□□□ -0.35
TRIM4-201ENST00000349062 DMWDQ09019 674 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 PYDC2Q56P42 97 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 ELMOD2Q8IZ81 293 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 MESP1Q9BRJ9 268 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 HCAR1Q9BXC0 346 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
TRIM4-201ENST00000349062 IGKV1D-16P01601 117 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 RPS25P62851 125 aaKnown RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 NCF4Q15080 339 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 ALG10BQ5I7T1 473 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 SAMD14Q8IZD0 417 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 OR2I1PQ8NGU4 316 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 OR4K13Q8NH42 304 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 CD180Q99467 661 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 DPYSL5Q9BPU6 564 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 HINT3Q9NQE9 182 aaKnown RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 SLITRK5O94991 958 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 RAB36O95755 333 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 ACVR2AP27037 513 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 ITPKBP27987 946 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 OMPP47874 163 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 TSPAN31Q12999 210 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 CDK10Q15131 360 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 ARHGAP11BQ3KRB8 267 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 SLC36A4Q6YBV0 504 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 C16orf47Q6ZP98 133 aaPredicted RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 GLCCI1Q86VQ1 547 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 GKN2Q86XP6 184 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 UBQLNLQ8IYU4 475 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 FAM131CQ96AQ9 280 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 OMA1Q96E52 524 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 MND1Q9BWT6 205 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 FOLH1BQ9HBA9 442 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 PDE7BQ9NP56 450 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 FLRT3Q9NZU0 649 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 PTGFRNQ9P2B2 879 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
TRIM4-201ENST00000349062 MRPS33Q9Y291 106 aaKnown RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 PRRC2CQ9Y520 2896 aaKnown RBP12.85□□□□□ -0.35
TRIM4-201ENST00000349062 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 TRAPPC13A5PLN9 417 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 C17orf105B2RV13 164 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 DVL2O14641 736 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 TNFSF14O43557 240 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 HRO43593 1189 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 RFPL3O75679 317 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SMIM10L1P0DMW3 83 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 NAA10P41227 235 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms