RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 C1GALT1Q9NS00 363 aa13.78□□□□□ -0.2
NUP50-201ENST00000347635 SMLR1H3BR10 107 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 FABP7O15540 132 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 AIFM1O95831 613 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 PROS1P07225 676 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 HTR1FP30939 366 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 YBX1P67809 324 aaKnown RBP13.77□□□□□ -0.2
NUP50-201ENST00000347635 DCST2Q5T1A1 773 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 ADAMTSL4Q6UY14 1074 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 C7orf34Q96L11 122 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 AMDHD1Q96NU7 426 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 ZNF471Q9BX82 626 aaPredicted RBP13.77□□□□□ -0.2
NUP50-201ENST00000347635 GLIPR2Q9H4G4 154 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 OR6C2Q9NZP2 312 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 KIAA0100Q14667 2235 aaKnown RBP13.77□□□□□ -0.2
NUP50-201ENST00000347635 ARPC1BO15143 372 aaKnown RBP13.77□□□□□ -0.2
NUP50-201ENST00000347635 SSTR2P30874 369 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 SOX9P48436 509 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 CTBP2P56545 445 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 B3GLCTQ6Y288 498 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 MBOAT2Q6ZWT7 520 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 PDZD9Q8IXQ8 264 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 GAL3ST3Q96A11 431 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 C16orf58Q96GQ5 468 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 MNTQ99583 582 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 TAS2R8Q9NYW2 309 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 TAS2R3Q9NYW6 316 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 PLEKHA6Q9Y2H5 1048 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 MEMO1Q9Y316 297 aa13.77□□□□□ -0.2
NUP50-201ENST00000347635 PLPP1O14494 284 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 ALDOBP05062 364 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 CD38P28907 300 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 CTHP32929 405 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 EIF5AP63241 154 aaKnown RBP13.77□□□□□ -0.21
NUP50-201ENST00000347635 CTBSQ01459 385 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 ACY1Q03154 408 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 HYAL2Q12891 473 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 MAPK14Q16539 360 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 LEG1Q6P5S2 330 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 PRICKLE2Q7Z3G6 844 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 GATSQ8NAP1 163 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 PLA2G15Q8NCC3 412 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 OR52E1Q8NGJ3 308 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 OR5AK2Q8NH90 309 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 GIMAP1Q8WWP7 306 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 MMABQ96EY8 250 aaPredicted RBP13.77□□□□□ -0.21
NUP50-201ENST00000347635 CCDC120Q96HB5 630 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 CST11Q9H112 138 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 SRA1Q9HD15 236 aaKnown RBP13.77□□□□□ -0.21
NUP50-201ENST00000347635 CENPMQ9NSP4 180 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 USP36Q9P275 1121 aaKnown RBP13.77□□□□□ -0.21
NUP50-201ENST00000347635 SH2B3Q9UQQ2 575 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 HEXBP07686 556 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 SHC2P98077 582 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 GBX1Q14549 363 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 LAS2Q8IYD9 372 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 MMP21Q8N119 569 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 SDR9C7Q8NEX9 313 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 OR2AJ1Q8NGZ0 328 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 OR52N1Q8NH53 320 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
NUP50-201ENST00000347635 TGM7Q96PF1 710 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 POTEKPQ9BYX7 375 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 RARRES3Q9UL19 164 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 TMEM14AQ9Y6G1 99 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 TRAV27A0A087WT01 109 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 TNFRSF10AO00220 468 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 HMGN4O00479 90 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 PRKACBP22694 351 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 EVI2BP34910 448 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 MTFR2Q6P444 385 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 SFXN4Q6P4A7 337 aa13.77□□□□□ -0.21
NUP50-201ENST00000347635 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 FRKP42685 505 aaPredicted RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 PRDX1Q06830 199 aaKnown RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 IL17RDQ8NFM7 739 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 PPP1R14AQ96A00 147 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ALOXE3Q9BYJ1 711 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 SIT1Q9Y3P8 196 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 NPIPA5A0A0B4J1W7 369 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 PRSS38A1L453 326 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 NPIPA7E9PJI5 369 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 SYT5O00445 386 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 GOSR2O14653 212 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 YKT6O15498 198 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 NPIPA8P0DM63 369 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 FBLP22087 321 aaKnown RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 B4GALNT1Q00973 533 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 OR1Q1Q15612 314 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 CREB3L4Q8TEY5 395 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 DAZLQ92904 295 aaKnown RBP13.76□□□□□ -0.21
NUP50-201ENST00000347635 MED20Q9H944 212 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 ASB6Q9NWX5 421 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 CYB5AP00167 134 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 C1QBP02746 253 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 GYPBP06028 91 aa13.76□□□□□ -0.21
NUP50-201ENST00000347635 FPR3P25089 353 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms