RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 UPRTQ96BW1 309 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM74Q96NL1 305 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 P2RX7Q99572 595 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAAP24Q9BTP7 215 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 HHLA1C9JL84 531 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 BMP4P12644 408 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GRB10Q13322 594 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DECR1Q16698 335 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SLC35G1Q2M3R5 365 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAM182AQ5T1J6 154 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NUDT13Q86X67 352 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DMBX1Q8NFW5 382 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR10G2Q8NGC3 310 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 C19orf43Q9BQ61 176 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ALOXE3Q9BYJ1 711 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SYNPO2LQ9H987 977 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SPIN1Q9Y657 262 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 HIVEP3Q5T1R4 2406 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SYNGR4O95473 234 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PLP1P60201 277 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 MORN1Q5T089 497 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TNS4Q8IZW8 715 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TAS2R14Q9NYV8 317 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NACAE9PAV3 2078 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR5G3P0C626 314 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF20P17024 532 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 APEX1P27695 318 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SELENOVP59797 346 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ATP6V1FQ16864 119 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF343Q6P1L6 599 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF585AQ6P3V2 769 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KCNMB4Q86W47 210 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 POLR3FQ9H1D9 316 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DIP2AQ14689 1571 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CASTOR2A6NHX0 329 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GAPDHSO14556 408 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CTDSPLO15194 276 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KCNQ2O43526 872 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZFPL1O95159 310 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR6A2O95222 327 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR10J1P30954 320 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 RBM39Q14498 530 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 BCL2L15Q5TBC7 163 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TTLL10Q6ZVT0 673 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 MRPL37Q9BZE1 423 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 POLR2J3Q9H1A7 115 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ST6GALNAC4Q9H4F1 302 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TCRBV21S2A2A0A5A6 115 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CDHR4A6H8M9 788 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SOX15O60248 233 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 MED6O75586 246 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TCN2P20062 427 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAM74A3Q4VXF1 159 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GLT8D1Q68CQ7 371 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FRMPD2BQ6IN97 320 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 LRRC55Q6ZSA7 311 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NAT8LQ8N9F0 302 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 EXD3Q8N9H8 876 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR4K14Q8NGD5 310 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 IGDCC4Q8TDY8 1250 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CASD1Q96PB1 797 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SEBOXQ9HB31 216 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1B0GV50 99 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 I6L893 689 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FGF10O15520 208 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 LDB2O43679 373 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GADD45GO95257 159 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CDX1P47902 265 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KLK7P49862 253 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 C18orf21Q32NC0 220 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR2T5Q6IEZ7 315 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SPPL2CQ8IUH8 684 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR4K17Q8NGC6 315 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR4C15Q8NGM1 316 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR2T29Q8NH02 315 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DNAJA3Q96EY1 480 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ACO2Q99798 780 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 VAX2Q9UIW0 290 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PCDHB1Q9Y5F3 818 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 A0A0U1RQV5 110 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OR2T1O43869 369 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 POU3F4P49335 361 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DCST1Q5T197 706 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAM102AQ5T9C2 384 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CYHR1Q6ZMK1 362 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF783Q6ZMS7 281 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ALYREFQ86V81 257 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SORBS1Q9BX66 1292 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FAM126AQ9BYI3 521 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 IL21RQ9HBE5 538 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KLHL9Q9P2J3 617 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1W2PQL4 384 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CYP2A6P11509 494 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PRDX4Q13162 271 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CPTPQ5TA50 214 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CAPN13Q6MZZ7 669 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NAA40Q86UY6 237 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 LRRC56Q8IYG6 542 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ACY3Q96HD9 319 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms