RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 KIAA1324Q6UXG2 1013 aaKnown RBP11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 UNQ6126/PRO20091Q6UXV3 157 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 PHOSPHO1Q8TCT1 267 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 SEC16AO15027 2179 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 TVP23AA6NH52 213 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 B4GALT2O60909 372 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 CRMP1Q14194 572 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 NR4A3Q92570 626 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 DVL3Q92997 716 aaPredicted RBP11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 KCTD12Q96CX2 325 aaKnown RBP11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 CNTNAP3BQ96NU0 1288 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 C1GALT1Q9NS00 363 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 REV1Q9UBZ9 1251 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
SSX2IP-201ENST00000342203 TMEM129A0AVI4 362 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 GPR171O14626 319 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 ADH1CP00326 375 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 ZNF865P0CJ78 1059 aaPredicted RBP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 RAB3AP20336 220 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 CERS1P27544 350 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 FRKP42685 505 aaPredicted RBP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 LUMP51884 338 aaPredicted RBP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 PRKCZQ05513 592 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 KIAA0040Q15053 153 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 YOD1Q5VVQ6 348 aaPredicted RBP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 LRFN4Q6PJG9 635 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 NDUFAF7Q7L592 441 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 C12orf57Q99622 126 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 BACE2Q9Y5Z0 518 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 V9GYH0 126 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 NHSQ6T4R5 1651 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 ZNF878C9JN71 531 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 SSX5O60225 188 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 LIM2P55344 173 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 ZNF805Q5CZA5 627 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 AFMIDQ63HM1 303 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 OR5M10Q6IEU7 315 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 NKAIN4Q8IVV8 208 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 NAXEQ8NCW5 288 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 DCUN1D4Q92564 292 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 UCN3Q969E3 161 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 FBXW5Q969U6 566 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 C3orf49Q96BT1 292 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 BPIFA2Q96DR5 249 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 ABRACLQ9P1F3 81 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 COLEC10Q9Y6Z7 277 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 CHP2O43745 196 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 CDC40O60508 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 RD3LP0DJH9 198 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 C6P13671 934 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 RGS19P49795 217 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 TIAL1Q01085 375 aaKnown RBP eCLIP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 TEKQ02763 1124 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 VITQ6UXI7 678 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 MFSD8Q8NHS3 518 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 TMEM168Q9H0V1 697 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 HINT3Q9NQE9 182 aaKnown RBP11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 GABRQQ9UN88 632 aa11.71□□□□□ -0.53
SSX2IP-201ENST00000342203 CKAP5Q14008 2032 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 C1orf226A1L170 272 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 TPOP07202 933 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 TPGS2Q68CL5 300 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 OR6V1Q8N148 313 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 TMEM99Q8N816 258 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 OR52I2Q8NH67 350 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 CHTF18Q8WVB6 975 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 AUNIPQ9H7T9 357 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 ZMAT3Q9HA38 289 aaKnown RBP11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 RXFP3Q9NSD7 469 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 TEX13DA0A0J9YY54 714 aaPredicted RBP11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 B3GALNT1O75752 331 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 UBL4AP11441 157 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 UGT2B7P16662 529 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 HSD17B2P37059 387 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 RAD52P43351 418 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 TDGQ13569 410 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 ESX1Q8N693 406 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 TMEM255BQ8WV15 326 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 RAD9AQ99638 391 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 MS4A7Q9GZW8 240 aaPredicted RBP11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 GRHPRQ9UBQ7 328 aa11.71□□□□□ -0.54
SSX2IP-201ENST00000342203 WRBO00258 174 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 DRD2P14416 443 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 IRF5Q13568 498 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 IHHQ14623 411 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 LEG1Q6P5S2 330 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 TPRA1Q86W33 373 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 NRROSQ86YC3 692 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 SVBPQ8N300 66 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 CPA6Q8N4T0 437 aa11.7□□□□□ -0.54
SSX2IP-201ENST00000342203 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms