RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 MRPS18BQ9Y676 258 aaKnown RBP15.89■□□□□ 0.13
CLDN4-201ENST00000340958 SDK2Q58EX2 2172 aa15.89■□□□□ 0.13
CLDN4-201ENST00000340958 USP24Q9UPU5 2620 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 DPPA5A6NC42 116 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 SLC16A6O15403 523 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 NADKO95544 446 aaPredicted RBP15.88■□□□□ 0.13
CLDN4-201ENST00000340958 THY1P04216 161 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 GSTM3P21266 225 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 GSSP48637 474 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 IDH2P48735 452 aaKnown RBP15.88■□□□□ 0.13
CLDN4-201ENST00000340958 RPP38P78345 283 aaKnown RBP15.88■□□□□ 0.13
CLDN4-201ENST00000340958 IL5RAQ01344 420 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 SKP2Q13309 424 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 RTP5Q14D33 572 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 FNDC7Q5VTL7 733 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 FCRLBQ6BAA4 426 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 ULK3Q6PHR2 472 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 KLHL17Q6TDP4 642 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 UGT2A3Q6UWM9 527 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 MBOAT2Q6ZWT7 520 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 PRICKLE2Q7Z3G6 844 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 NRMQ8IXM6 262 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 CDK20Q8IZL9 346 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 ZNF786Q8N393 782 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 SETD9Q8NE22 299 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 GNPDA2Q8TDQ7 276 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 DGCR6LQ9BY27 220 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 GABARAPL3Q9BY60 117 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 FAM117AQ9C073 453 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 LAT2Q9GZY6 243 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 CDCP1Q9H5V8 836 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 METTL7AQ9H8H3 244 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 EXOSC3Q9NQT5 275 aaKnown RBP15.88■□□□□ 0.13
CLDN4-201ENST00000340958 PCDHGB5Q9Y5G0 923 aa15.88■□□□□ 0.13
CLDN4-201ENST00000340958 EPG5Q9HCE0 2579 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ANKRD11Q6UB99 2663 aaPredicted RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 A0A0B4J2E0 115 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 A0A1B0GX12 115 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 KPNA4O00629 521 aaPredicted RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ZNF354AO60765 605 aaPredicted RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ADAM11O75078 769 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 NTN1O95631 604 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 LYNP07948 512 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 SLC6A8P48029 635 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 IL18R1Q13478 541 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 CBLN3Q6UW01 205 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 THAP5Q7Z6K1 395 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ZER1Q7Z7L7 766 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 MRGPREQ86SM8 312 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 LSMEM1Q8N8F7 131 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 TMEM239Q8WW34 195 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ASB15Q8WXK1 588 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 TTC9Q92623 222 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 NKD1Q969G9 470 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 FAM46AQ96IP4 442 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 NODALQ96S42 347 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 CCDC86Q9H6F5 360 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 YARS2Q9Y2Z4 477 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 A0A1W2PQ72 361 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 MASP2O00187 686 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 GNB5O14775 395 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 CHP2O43745 196 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 EIF4E2O60573 245 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 TNFAIP8O95379 198 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 OSMP13725 252 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 SSR4P51571 173 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 LSM11P83369 360 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ZNF117Q03924 483 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 IL10RAQ13651 578 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 KEAP1Q14145 624 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 WBP2NLQ6ICG8 309 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 C1orf94Q6P1W5 598 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 OPN5Q6U736 354 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 USP51Q70EK9 711 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 RPS19BP1Q86WX3 136 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 MEX3DQ86XN8 651 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 MISPQ8IVT2 679 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 PARP8Q8N3A8 854 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 TMEM156Q8N614 296 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 DNAJA4Q8WW22 397 aaPredicted RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 ZCCHC14Q8WYQ9 949 aaKnown RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 SPACA9Q96E40 222 aaPredicted RBP15.87■□□□□ 0.13
CLDN4-201ENST00000340958 HS6ST2Q96MM7 605 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 CNIH4Q9P003 139 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 SCOCQ9UIL1 159 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 MED31Q9Y3C7 131 aa15.87■□□□□ 0.13
CLDN4-201ENST00000340958 TP53I11O14683 189 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 OIP5O43482 229 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 FADS1O60427 444 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 SOX14O95416 240 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 FBXO45P0C2W1 286 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 SOX3P41225 446 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 RPS6KA3P51812 740 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 ESRRGP62508 458 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 COX10Q12887 443 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 ATP1A4Q13733 1029 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 CBFBQ13951 182 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 IL20RBQ6UXL0 311 aa15.86■□□□□ 0.13
CLDN4-201ENST00000340958 RNF113BQ8IZP6 322 aaKnown RBP15.86■□□□□ 0.13
CLDN4-201ENST00000340958 FAM71CQ8NEG0 241 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms