RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 SLC6A8P48029 635 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
ERCC1-203ENST00000340192 STX1BP61266 288 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 SIRPAP78324 504 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 TXNL4AP83876 142 aaKnown RBP13.11□□□□□ -0.31
ERCC1-203ENST00000340192 CHRNEQ04844 493 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 FGFBP1Q14512 234 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 QPRTQ15274 297 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 HBMQ6B0K9 141 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ANKFN1Q8N957 763 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 OR2V1Q8NHB1 315 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ZFP90Q8TF47 636 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ARSGQ96EG1 525 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ITCHQ96J02 903 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 MRGPRX4Q96LA9 322 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 MAGEB18Q96M61 343 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 QRSL1Q9H0R6 528 aaKnown RBP13.11□□□□□ -0.31
ERCC1-203ENST00000340192 PAQR5Q9NXK6 330 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-203ENST00000340192 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 POLQO75417 2590 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 ANKHD1Q8IWZ3 2542 aaKnown RBP13.1□□□□□ -0.31
ERCC1-203ENST00000340192 AKAP9Q99996 3911 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 TUBAL3A6NHL2 446 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 A8MXE2 369 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 DNAJA2O60884 412 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 BCAS1O75363 584 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-203ENST00000340192 CHRM4P08173 479 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 CAPN3P20807 821 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 PGM1P36871 562 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 MRPL19P49406 292 aaKnown RBP13.1□□□□□ -0.31
ERCC1-203ENST00000340192 MVDP53602 400 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 SORDQ00796 357 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 GUSBP1Q15486 140 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 SLC25A53Q5H9E4 307 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 BTLAQ7Z6A9 289 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 TMEM200AQ86VY9 491 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 FAM71CQ8NEG0 241 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 AURKBQ96GD4 344 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-203ENST00000340192 KLHL15Q96M94 604 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 CCDC28BQ9BUN5 200 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 SLC38A1Q9H2H9 487 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
ERCC1-203ENST00000340192 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
ERCC1-203ENST00000340192 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
ERCC1-203ENST00000340192 CREBBPQ92793 2442 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 CLDN24A6NM45 220 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 GJE1A6NN92 205 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-203ENST00000340192 MSTNO14793 375 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 SYNGR4O95473 234 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 NR2F1P10589 423 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 ETFAP13804 333 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 PGCP20142 388 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 CPOXP36551 454 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 CRATP43155 626 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 CARD18P57730 90 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 KCNJ10P78508 379 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 TMEM176BQ3YBM2 270 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-203ENST00000340192 GTDC1Q4AE62 458 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 PDSS1Q5T2R2 415 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 SLC2A7Q6PXP3 512 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 LRRC74BQ6ZQY2 392 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 FUNDC1Q8IVP5 155 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 ATP6V1C2Q8NEY4 427 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 LINC01560Q8TB33 94 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 GTF2H4Q92759 462 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 OSTF1Q92882 214 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 THOC1Q96FV9 657 aaKnown RBP13.09□□□□□ -0.31
ERCC1-203ENST00000340192 OPN3Q9H1Y3 402 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-203ENST00000340192 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 PCDHB14Q9Y5E9 798 aa13.09□□□□□ -0.31
ERCC1-203ENST00000340192 MPDZO75970 2070 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 AGAP5A6NIR3 686 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 CTAG2O75638 210 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 PLGP00747 810 aaPredicted RBP13.08□□□□□ -0.32
ERCC1-203ENST00000340192 CGAP01215 116 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 MAGEA8P43361 318 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 SESN3P58005 492 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 PLAURQ03405 335 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 SELENBP1Q13228 472 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 MAPK11Q15759 364 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 BLOC1S3Q6QNY0 202 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 FAM214BQ7L5A3 538 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 ST8SIA1Q92185 356 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 GMPPAQ96IJ6 420 aaPredicted RBP13.08□□□□□ -0.32
ERCC1-203ENST00000340192 GPATCH1Q9BRR8 931 aaKnown RBP13.08□□□□□ -0.32
ERCC1-203ENST00000340192 SRXN1Q9BYN0 137 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 PAIP1Q9H074 479 aaKnown RBP13.08□□□□□ -0.32
ERCC1-203ENST00000340192 MTHFD2LQ9H903 347 aaPredicted RBP13.08□□□□□ -0.32
ERCC1-203ENST00000340192 TIGARQ9NQ88 270 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.08□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.32
ERCC1-203ENST00000340192 CCDC167Q9P0B6 97 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms