RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 UPK1BO75841 260 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PRKCAP17252 672 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 COL9A1P20849 921 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CFL1P23528 166 aaKnown RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CRMP1Q14194 572 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ACSM3Q53FZ2 586 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CD93Q9NPY3 652 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TAS2R10Q9NYW0 307 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FAM186AA6NE01 2351 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 KRBA1A5PL33 1030 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 BCAT2O15382 392 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SPARCP09486 303 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF41P51814 821 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ADPRMQ3LIE5 342 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 GARNL3Q5VVW2 1013 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PTCRAQ6ISU1 281 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF627Q7L945 461 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SLC38A1Q9H2H9 487 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 MED17Q9NVC6 651 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF639Q9UID6 485 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 IER3IP1Q9Y5U9 82 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 NPIPB8E9PQR5 432 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 EIF1AYO14602 144 aaKnown RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CAPNS1P04632 268 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 GSTT2BP0CG30 244 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 UBL4AP11441 157 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FBXO42Q6P3S6 717 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FAM160A2Q8N612 972 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FRMD1Q8N878 549 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM255BQ8WV15 326 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SGCDQ92629 289 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CRB3Q9BUF7 120 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CPNE5Q9HCH3 593 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FTSJ1Q9UET6 329 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 KLHL21Q9UJP4 597 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 DOCK7Q96N67 2140 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 SPTY2D1-AS1A0A0U1RR47 76 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 FAM172BPA6NC97 362 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TBX19O60806 448 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PLGP00747 810 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TNFSF8P32971 234 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 C14orf28Q4W4Y0 310 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 GPAT4Q86UL3 456 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 OR7G2Q8NG99 324 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 DPAGT1Q9H3H5 408 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 TRPV4Q9HBA0 871 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 ARHGEF17Q96PE2 2063 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PSMD9O00233 223 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 CD1CP29017 333 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 MAGEA2P43356 314 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 UBE2UQ5VVX9 321 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 GDF7Q7Z4P5 450 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 JAGN1Q8N5M9 183 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 RXFP3Q9NSD7 469 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PLCXD1Q9NUJ7 323 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PMF1-BGLAPU3KQ54 211 aa5.86□□□□□ -1.47
PRKDC-202ENST00000338368 PRSS23O95084 383 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 GP2P55259 537 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 DTX3Q8N9I9 347 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 GRIP1Q9Y3R0 1128 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TEKQ02763 1124 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 OCLNQ16625 522 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 DHRS4L2Q6PKH6 230 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 USP51Q70EK9 711 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 MED25Q71SY5 747 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ASCC3Q8N3C0 2202 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 OR5W2Q8NH69 310 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TRIOBPQ9H2D6 2365 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SEMA6CQ9H3T2 930 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SLC22A7Q9Y694 548 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF236Q9UL36 1845 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 C2CD4DB7Z1M9 353 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SCG5P05408 212 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 PRAMEF8Q5VWM4 474 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 PRAMEF7Q5VXH5 474 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 LRRC56Q8IYG6 542 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SLC22A8Q8TCC7 542 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ALG8Q9BVK2 526 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 LYRM4Q9HD34 91 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 B3GNT3Q9Y2A9 372 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 UPK1AO00322 258 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 PEX12O00623 359 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 LYSMD4Q5XG99 296 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 PEG10Q86TG7 708 aaKnown RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 Q8N402 240 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 TNFAIP8L1Q8WVP5 186 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 LCORQ96JN0 433 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-202ENST00000338368 B3GNT4Q9C0J1 378 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ABCG5Q9H222 651 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SLC6A20Q9NP91 592 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SIRT5Q9NXA8 310 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 OR2A25A4D2G3 310 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 GLULP15104 373 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 HSD17B7P56937 341 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 CD83Q01151 205 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SNTA1Q13424 505 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF101Q8IZC7 436 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 C10orf111Q8N326 155 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 SLC37A3Q8NCC5 494 aa5.85□□□□□ -1.47
PRKDC-202ENST00000338368 RHBDD1Q8TEB9 315 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms