RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PEPDP12955 493 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 BMP7P18075 431 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 TCEA1P23193 301 aaKnown RBP10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 HTR3AP46098 478 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 IDH2P48735 452 aaKnown RBP10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 SESN3P58005 492 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 HSF1Q00613 529 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 EPS8Q12929 822 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 BCL2A1Q16548 175 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 DUSP7Q16829 419 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 PLPPR5Q32ZL2 321 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 GXYLT1Q4G148 440 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 LRRC23Q53EV4 343 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 NHSL2Q5HYW2 709 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 VASNQ6EMK4 673 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 CCDC121Q6ZUS5 278 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 GTPBP8Q8N3Z3 284 aaPredicted RBP10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 PROX1Q92786 737 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 FAM162AQ96A26 154 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 TAMM41Q96BW9 452 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 MRGPRX4Q96LA9 322 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 TIMP4Q99727 224 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 THTPAQ9BU02 230 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 GMPR2Q9P2T1 348 aaKnown RBP10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 PACSIN3Q9UKS6 424 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 LIPGQ9Y5X9 500 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 AP4B1Q9Y6B7 739 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 ATMQ13315 3056 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC19A2O60779 497 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 BCAS1O75363 584 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 STAMBPO95630 424 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 OPN1SWP03999 348 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 TPOP07202 933 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 FESP07332 822 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 HOXD4P09016 255 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 GKN3PP0CG01 181 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF17P17021 662 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 PRKCAP17252 672 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 GGT1P19440 569 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 ME2P23368 584 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 FKBP2P26885 142 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 APOBEC1P41238 236 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC1A3P43003 542 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 GFRA1P56159 465 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 RGS8P57771 180 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 B3GALT5-AS1P59052 145 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 SELENOWP63302 87 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 BNIP2Q12982 314 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 CEACAM7Q14002 265 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 TOMM34Q15785 309 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 TMEM44Q2T9K0 475 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 WBP2NLQ6ICG8 309 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 PM20D2Q8IYS1 436 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 OR5M1Q8NGP8 315 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 FAM57AQ8TBR7 257 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 RNF145Q96MT1 663 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF559Q9BR84 538 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 UGT2B28Q9BY64 529 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 TRIM2Q9C040 744 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 GORASP2Q9H8Y8 452 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 TMEM27Q9HBJ8 222 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 ALKBH4Q9NXW9 302 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 RPS6KB2Q9UBS0 482 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 EGFL7Q9UHF1 273 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 MAGEL2Q9UJ55 1249 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 RPS6KA6Q9UK32 745 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 OSGIN2Q9Y236 505 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC9A8Q9Y2E8 581 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF835Q9Y2P0 537 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF337Q9Y3M9 751 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 CHST2Q9Y4C5 530 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 COL6A6A6NMZ7 2263 aa10.78□□□□□ -0.68
SPTLC1-202ENST00000337841 NINQ8N4C6 2090 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 GJE1A6NN92 205 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 AHRRA9YTQ3 701 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 AP3D1O14617 1153 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 DNAJC8O75937 253 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF682O95780 498 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CPN1P15169 458 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 NCK1P16333 377 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 POU3F2P20265 443 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CD247P20963 164 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 GNLYP22749 145 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 ACAA2P42765 397 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 STARP49675 285 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 NCALDP61601 193 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 RAC1P63000 192 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CRYZQ08257 329 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 MERTKQ12866 999 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 MRPL49Q13405 166 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 PDSS1Q5T2R2 415 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 Q6ZPB1 254 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 FKBP9P1Q75LS8 142 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CHMP1BQ7LBR1 199 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 GRINAQ7Z429 371 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms