RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 NR2F1P10589 423 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 ATP1B2P14415 290 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 RAD52P43351 418 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 KCNJ3P48549 501 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 SIM1P81133 766 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 SYPL1Q16563 259 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 ENTPD8Q5MY95 495 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 FAM109BQ6ICB4 259 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 FAM71E1Q6IPT2 247 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 TMUB2Q71RG4 321 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 LINGO2Q7L985 606 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 MRPL43Q8N983 215 aaKnown RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 ELP4Q96EB1 424 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 WDR89Q96FK6 387 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 FAM46AQ96IP4 442 aaKnown RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 C7orf50Q9BRJ6 194 aaKnown RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 TMEM106CQ9BVX2 250 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 OR51M1Q9H341 326 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 GAREM1Q9H706 876 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 DENND4CQ5VZ89 1909 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 SPDEFO95238 335 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 NFATC1O95644 943 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 GNSP15586 552 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 PSMB1P20618 241 aaKnown RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 S100PP25815 95 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 CALCRP30988 508 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 RORAP35398 523 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 RFC3P40938 356 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 RNF144AP50876 292 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 HTRA4P83105 476 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 MC2RQ01718 297 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 OC90Q02509 493 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 PDE7AQ13946 482 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 SLBPQ14493 270 aaKnown RBP eCLIP16.89■□□□□ 0.29
PKP3-201ENST00000331563 SYTL3Q4VX76 610 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 PLEKHS1Q5SXH7 462 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 CXXC5Q7LFL8 322 aaKnown RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 C6orf120Q7Z4R8 191 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 GRASPQ7Z6J2 395 aaPredicted RBP16.89■□□□□ 0.29
PKP3-201ENST00000331563 COMTD1Q86VU5 262 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 LMNTD1Q8N9Z9 388 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 OR6T1Q8NGN1 323 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 OR51Q1Q8NH59 317 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 ASZ1Q8WWH4 475 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 KCNK12Q9HB15 430 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 SLC22A11Q9NSA0 550 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 TAAR2Q9P1P5 351 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.29
PKP3-201ENST00000331563 TMEM82A0PJX8 343 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 TTLL8A6PVC2 850 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SOCS6O14544 535 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 GRM6O15303 877 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 RHOP08100 348 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SLC7A9P82251 487 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 CRTC1Q6UUV9 634 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 LINC00471Q8N535 108 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 C12orf76Q8N812 135 aaPredicted RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 OR11G2Q8NGC1 345 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 OR4D9Q8NGE8 314 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 CMSS1Q9BQ75 279 aaKnown RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 NANSQ9NR45 359 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 NTMQ9P121 344 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MRTO4Q9UKD2 239 aaKnown RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 ACAD8Q9UKU7 415 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 PRAF2O60831 178 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MOSPD3O75425 235 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SLC2A10O95528 541 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 PTAFRP25105 342 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 RAP2BP61225 183 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SEC61A1P61619 476 aaKnown RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 ACSM1Q08AH1 577 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 GSG1LQ6UXU4 331 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 NHLRC1Q6VVB1 395 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SIRT6Q8N6T7 355 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 ZNF565Q8N9K5 539 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 ZNF671Q8TAW3 534 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 GCDHQ92947 438 aaPredicted RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 DMRTA2Q96SC8 542 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 ALG8Q9BVK2 526 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MYNNQ9NPC7 610 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MAN2C1Q9NTJ4 1040 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 PIPOXQ9P0Z9 390 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MIOXQ9UGB7 285 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 GIPP09681 153 aaPredicted RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 PVALBP20472 110 aaPredicted RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 TAS2R41P59536 307 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 KLF9Q13886 244 aaPredicted RBP16.88■□□□□ 0.29
PKP3-201ENST00000331563 MELKQ14680 651 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 CDKN3Q16667 212 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MICBQ29980 383 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SYT9Q86SS6 491 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 C7orf61Q8IZ16 206 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 MORN4Q8NDC4 146 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 OR5W2Q8NH69 310 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 SPPL3Q8TCT6 385 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 CYB5D2Q8WUJ1 264 aa16.88■□□□□ 0.29
PKP3-201ENST00000331563 ZDHHC6Q9H6R6 413 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms