RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 STK25O00506 426 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 TOR1AO14656 332 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CDC123O75794 336 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 ZIC2O95409 532 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 GKN3PP0CG01 181 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CRYZQ08257 329 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 OCLNQ16625 522 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 BHLHB9Q6PI77 547 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CHMP1BQ7LBR1 199 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 LHFPL3Q86UP9 236 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 BEST4Q8NFU0 473 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 WBP1Q96G27 269 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC35A4Q96G79 324 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 SCMH1Q96GD3 660 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 EMC8O43402 210 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CTSBP07858 339 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 GIPRP48546 466 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 TPMTP51580 245 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 BTG1P62324 171 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 COL28A1Q2UY09 1125 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 Q6ZSR6 202 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 MFSD9Q8NBP5 474 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 RBPMSQ93062 196 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 MARC2Q969Z3 335 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 MRPL38Q96DV4 380 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 ABCG5Q9H222 651 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 KIR3DX1Q9H7L2 352 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 RDH8Q9NYR8 311 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 EXTL2Q9UBQ6 330 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CES1P1Q9UKY3 287 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 GSTK1Q9Y2Q3 226 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CD8B2A6NJW9 211 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 PIP5K1CO60331 668 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CD8BP10966 210 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 UGT2B7P16662 529 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 STOMP27105 288 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 AHRP35869 848 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 PUDPQ08623 228 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 CAMK2DQ13557 499 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 RUNX2Q13950 521 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 STK11Q15831 433 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 MRM1Q6IN84 353 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 ZNF425Q6IV72 752 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 FIGNL1Q6PIW4 674 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 METAP1DQ6UB28 335 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 MARCH9Q86YJ5 346 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 FBXO34Q9NWN3 711 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 OR6C2Q9NZP2 312 aa14.44□□□□□ -0.1
SHROOM1-201ENST00000319854 ARRDC5A6NEK1 342 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 HRO43593 1189 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 TOXO94900 526 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 TNFRSF4P43489 277 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 VSX2P58304 361 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 EXOSC7Q15024 291 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 TUSC1Q2TAM9 212 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 SMARCD3Q6STE5 483 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 ADGRG3Q86Y34 549 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 NRROSQ86YC3 692 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 MS4A15Q8N5U1 240 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 RLN3Q8WXF3 142 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 SAP130Q9H0E3 1048 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 HCRTR1O43613 425 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 LIMS3P0CW19 117 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 LIMS4P0CW20 117 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 RPL6Q02878 288 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 NFATC4Q14934 902 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 PAQR7Q86WK9 346 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 FAM26EQ8N5C1 309 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 OR13H1Q8NG92 308 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 OR56A1Q8NGH5 318 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 BBS10Q8TAM1 723 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 THAP7Q9BT49 309 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 SPATA5L1Q9BVQ7 753 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 EMC7Q9NPA0 242 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 UBQLN2Q9UHD9 624 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 SLCO1B1Q9Y6L6 691 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 TICRRQ7Z2Z1 1910 aa14.43□□□□□ -0.1
SHROOM1-201ENST00000319854 FAM183AA6NL82 134 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 TBX19O60806 448 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 GNSP15586 552 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 NT5EP21589 574 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 FGF9P31371 208 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 GABRA5P31644 462 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 SRP54P61011 504 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ADAM15Q13444 863 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ALG11Q2TAA5 492 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 CD200R1LQ6Q8B3 271 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 FIGLAQ6QHK4 219 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 CFAP77Q6ZQR2 320 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 RTL4Q6ZR62 310 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 KANSL1Q7Z3B3 1105 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 NRMQ8IXM6 262 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ARIH2OSQ8N7S6 290 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 SRFBP1Q8NEF9 429 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 NEIL3Q8TAT5 605 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 TMEM255BQ8WV15 326 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 ST8SIA4Q92187 359 aa14.42□□□□□ -0.1
SHROOM1-201ENST00000319854 UFD1Q92890 307 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms