RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 EEF1A1P5Q5VTE0 462 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 ZNF474Q6S9Z5 364 aaPredicted RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 ZNF621Q6ZSS3 439 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 HDXQ7Z353 690 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 LSRQ86X29 649 aaPredicted RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 GOLGA6L1Q8N7Z2 621 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 ANKFN1Q8N957 763 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 GLB1L3Q8NCI6 653 aaPredicted RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 ATP6V1C2Q8NEY4 427 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 TOR1AIP2Q8NFQ8 470 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 LRRC8CQ8TDW0 803 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 C7orf26Q96N11 449 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 SRXN1Q9BYN0 137 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 QRSL1Q9H0R6 528 aaKnown RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 COQ10BQ9H8M1 238 aa14.61□□□□□ -0.07
LSM1-201ENST00000311351 SDR39U1Q9NRG7 319 aaPredicted RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 GPC6Q9Y625 555 aaPredicted RBP14.61□□□□□ -0.07
LSM1-201ENST00000311351 SH3D21A4FU49 640 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 RFXANKO14593 260 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 UBDO15205 165 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 SYNGR4O95473 234 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 H6PDO95479 791 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 NTN1O95631 604 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 CGAP01215 116 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 EPXP11678 715 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 HPCAP84074 193 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 PLAURQ03405 335 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 CHRNEQ04844 493 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 FAM27E3Q08E93 113 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 CBFBQ13951 182 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 FGFBP1Q14512 234 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 SYPL1Q16563 259 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 GSTA3Q16772 222 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 GTDC1Q4AE62 458 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 EPGNQ6UW88 154 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 FAM214BQ7L5A3 538 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 ZNF619Q8N2I2 560 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 TRIML2Q8N7C3 387 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 ROBO4Q8WZ75 1007 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 OSTF1Q92882 214 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 ZG16BQ96DA0 208 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 THUMPD3Q9BV44 507 aaKnown RBP14.6□□□□□ -0.07
LSM1-201ENST00000311351 LAT2Q9GZY6 243 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 LIME1Q9H400 295 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 POLE3Q9NRF9 147 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 PAQR5Q9NXK6 330 aaPredicted RBP14.6□□□□□ -0.07
LSM1-201ENST00000311351 ZIM2Q9NZV7 527 aa14.6□□□□□ -0.07
LSM1-201ENST00000311351 MCTS1Q9ULC4 181 aaKnown RBP14.6□□□□□ -0.07
LSM1-201ENST00000311351 HIVEP1P15822 2718 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 CLDN24A6NM45 220 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 PLGP00747 810 aaPredicted RBP14.59□□□□□ -0.07
LSM1-201ENST00000311351 IL6P05231 212 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 CHRM4P08173 479 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 CD8BP10966 210 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 H2AFXP16104 143 aaPredicted RBP14.59□□□□□ -0.07
LSM1-201ENST00000311351 ADH6P28332 368 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 DNAJA1P31689 397 aaKnown RBP14.59□□□□□ -0.07
LSM1-201ENST00000311351 PGM1P36871 562 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 DAZAP2Q15038 168 aaPredicted RBP14.59□□□□□ -0.07
LSM1-201ENST00000311351 POU4F3Q15319 338 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 ZNF239Q16600 458 aaKnown RBP14.59□□□□□ -0.07
LSM1-201ENST00000311351 SLC25A53Q5H9E4 307 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 EIF3MQ7L2H7 374 aaKnown RBP14.59□□□□□ -0.07
LSM1-201ENST00000311351 CDC20BQ86Y33 519 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 ZNF610Q8N9Z0 462 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 FAM71CQ8NEG0 241 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 VPS33AQ96AX1 596 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 MRGPRX4Q96LA9 322 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 EBF4Q9BQW3 602 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 SAP130Q9H0E3 1048 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 SLC38A1Q9H2H9 487 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 VIPAS39Q9H9C1 493 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 PROCRQ9UNN8 238 aa14.59□□□□□ -0.07
LSM1-201ENST00000311351 UQCRHLA0A096LP55 91 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 A0A1W2PNR3 127 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 ETV2O00321 342 aaPredicted RBP14.58□□□□□ -0.08
LSM1-201ENST00000311351 DNAJA2O60884 412 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 SS18L1O75177 396 aaPredicted RBP14.58□□□□□ -0.08
LSM1-201ENST00000311351 GUSBP08236 651 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 NID1P14543 1247 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 POU2F1P14859 743 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 CD79BP40259 229 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 KCNJ5P48544 419 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 POLR2JP52435 117 aaKnown RBP14.58□□□□□ -0.08
LSM1-201ENST00000311351 CTBP2P56545 445 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 CARD18P57730 90 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 LRRC74AQ0VAA2 488 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 SELENBP1Q13228 472 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 EXOC3L2Q2M3D2 409 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 TMEM176BQ3YBM2 270 aaPredicted RBP14.58□□□□□ -0.08
LSM1-201ENST00000311351 PDSS1Q5T2R2 415 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 FBXW10Q5XX13 1052 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 MIER2Q8N344 545 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 OR6K3Q8NGY3 331 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 RNF128Q8TEB7 428 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 ZFP90Q8TF47 636 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 ABHD3Q8WU67 409 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 DYDC1Q8WWB3 177 aa14.58□□□□□ -0.08
LSM1-201ENST00000311351 AURKBQ96GD4 344 aaPredicted RBP14.58□□□□□ -0.08
LSM1-201ENST00000311351 GMPPAQ96IJ6 420 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms