RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 LRIT2A6NDA9 550 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 IGHG1P01857 330 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 PRKACBP22694 351 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 MEX3BQ6ZN04 569 aaKnown RBP14.6□□□□□ -0.07
HCFC1-201ENST00000310441 HHLA2Q9UM44 414 aa14.6□□□□□ -0.07
HCFC1-201ENST00000310441 IL32P24001 234 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 SELENOWP63302 87 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 PLCXD3Q63HM9 321 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 KLHDC8AQ8IYD2 350 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 TCRBV21S2A2A0A5A6 115 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 KCNQ1P51787 676 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 CLEC1AQ8NC01 280 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 DRD5P21918 477 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 ENPP6Q6UWR7 440 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 HIST2H3AQ71DI3 136 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 NRMQ8IXM6 262 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 OR1J2Q8NGS2 313 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 DIO3P55073 304 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 UMODL1-AS1Q8N2C9 162 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 PRRC1Q96M27 445 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 ETV7Q9Y603 341 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 FOLR3P41439 243 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 CTSL3PQ5NE16 218 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 SFRP4Q6FHJ7 346 aaPredicted RBP14.59□□□□□ -0.07
HCFC1-201ENST00000310441 BPHLQ86WA6 291 aaPredicted RBP14.59□□□□□ -0.07
HCFC1-201ENST00000310441 OR56B1Q8NGI3 324 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 ACOT11Q8WXI4 607 aaPredicted RBP14.59□□□□□ -0.07
HCFC1-201ENST00000310441 LHX6Q9UPM6 363 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 RICTORQ6R327 1708 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 LILRB3O75022 631 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 FGF18O76093 207 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 MPIG6BO95866 241 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 EMC10Q5UCC4 262 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 DBF4BQ8NFT6 615 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 OR4K5Q8NGD3 323 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 OR6C4Q8NGE1 309 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 SIDT1Q9NXL6 827 aaKnown RBP14.59□□□□□ -0.07
HCFC1-201ENST00000310441 ELK1P19419 428 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 GABRA5P31644 462 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 FRS2Q8WU20 508 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 V9GY05 133 aa14.59□□□□□ -0.07
HCFC1-201ENST00000310441 DICER1Q9UPY3 1922 aaKnown RBP14.59□□□□□ -0.07
HCFC1-201ENST00000310441 FAM122CQ6P4D5 195 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 TMEM71Q6P5X7 295 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 TECPR1Q7Z6L1 1165 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 ZBTB8AQ96BR9 441 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 SIGLEC10Q96LC7 697 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 APOBEC3BQ9UH17 382 aaKnown RBP14.58□□□□□ -0.07
HCFC1-201ENST00000310441 BTNL2Q9UIR0 455 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 RPS5P46782 204 aaKnown RBP14.58□□□□□ -0.07
HCFC1-201ENST00000310441 CSNK1A1P48729 337 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 METTL27Q8N6F8 245 aaPredicted RBP14.58□□□□□ -0.07
HCFC1-201ENST00000310441 GATSQ8NAP1 163 aa14.58□□□□□ -0.07
HCFC1-201ENST00000310441 A0A0D9SEW6 157 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 PPT1P50897 306 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 LTB4RQ15722 352 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SLC14A2Q15849 920 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 WBP2NLQ6ICG8 309 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SLC5A8Q8N695 610 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SENP5Q96HI0 755 aaPredicted RBP14.58□□□□□ -0.08
HCFC1-201ENST00000310441 VRTNQ9H8Y1 702 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 TAS2R16Q9NYV7 291 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 B4GALT6Q9UBX8 382 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 A0A1B0GUL6 1792 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SGCEO43556 437 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 CNR2P34972 360 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 RNF4P78317 190 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 LIN7BQ9HAP6 207 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SLC22A11Q9NSA0 550 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 GATMP50440 423 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SNU13P55769 128 aaKnown RBP14.58□□□□□ -0.08
HCFC1-201ENST00000310441 ACY1Q03154 408 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 TMEM19Q96HH6 336 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 ZCCHC4Q9H5U6 513 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SYNPO2LQ9H987 977 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SRPK3Q9UPE1 567 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 POLHQ9Y253 713 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 NUDT19A8MXV4 375 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 CDK4P11802 303 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 PRDX3P30048 256 aaKnown RBP14.58□□□□□ -0.08
HCFC1-201ENST00000310441 ETV1P50549 477 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 MSS51Q4VC12 460 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 MKXQ8IYA7 352 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 CA5BQ9Y2D0 317 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 OR5K3A6NET4 321 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 F5H5K5 113 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SDHDO14521 159 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 SRYQ05066 204 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 LY6G5CQ5SRR4 150 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 CREB3L4Q8TEY5 395 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 MICU1Q9BPX6 476 aa14.58□□□□□ -0.08
HCFC1-201ENST00000310441 PPP1R3DO95685 299 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 HEXAP06865 529 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 CD79AP11912 226 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ICAM2P13598 275 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 JUNDP17535 347 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 FDXRP22570 491 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 ZNF133P52736 654 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-201ENST00000310441 GLB1L2Q8IW92 636 aa14.57□□□□□ -0.08
HCFC1-201ENST00000310441 NDNFQ8TB73 568 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms