RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LGI1O95970 557 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 CELA3AP09093 270 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 GP1BBP13224 206 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 ABOP16442 354 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 DMTNQ08495 405 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 QPRTQ15274 297 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 LRRC23Q53EV4 343 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 MTX3Q5HYI7 312 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 WIPI1Q5MNZ9 446 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 WLSQ5T9L3 541 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 VASNQ6EMK4 673 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 Q6ZPB1 254 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 RINLQ6ZS11 566 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 CCDC121Q6ZUS5 278 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 GRINAQ7Z429 371 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 RANBP3LQ86VV4 465 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 SPPL2CQ8IUH8 684 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 OR52E4Q8NGH9 312 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 FIG4Q92562 907 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 TAMM41Q96BW9 452 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 SLC6A15Q9H2J7 730 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 MMADHCQ9H3L0 296 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 GORASP2Q9H8Y8 452 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 SERINC1Q9NRX5 453 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 ACER3Q9NUN7 267 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 RLIMQ9NVW2 624 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 ACAD8Q9UKU7 415 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 VDAC3Q9Y277 283 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 ZNF835Q9Y2P0 537 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 SNX13Q9Y5W8 968 aa16.22■□□□□ 0.19
SSSCA1-201ENST00000309328 A0A1B0GTH9 108 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 FIGNL2A6NMB9 653 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 B4DXG7 233 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 OIP5O43482 229 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 GCM2O75603 506 aaPredicted RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 FESP07332 822 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 PEPDP12955 493 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 GABRA1P14867 456 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 PRKCAP17252 672 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 APOBEC1P41238 236 aaKnown RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 SLC1A3P43003 542 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 RGS8P57771 180 aaPredicted RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 NDUFAF6Q330K2 333 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 CYBRD1Q53TN4 286 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 WBP2NLQ6ICG8 309 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 HMGN2P46Q86SG4 172 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 CLIP4Q8N3C7 705 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 SMYD1Q8NB12 490 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 FAM57AQ8TBR7 257 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 SLC25A43Q8WUT9 341 aaPredicted RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 FAM162AQ96A26 154 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 ZNF559Q9BR84 538 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 TRIM2Q9C040 744 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 POLR2J2Q9GZM3 115 aaKnown RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 POLR2J3Q9H1A7 115 aaKnown RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 SAMD4AQ9UPU9 718 aaKnown RBP16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 HRH3Q9Y5N1 445 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 ZNF462Q96JM2 2506 aa16.21■□□□□ 0.19
SSSCA1-201ENST00000309328 NINQ8N4C6 2090 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 OR2M5A3KFT3 312 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 C17orf51A8MQB3 221 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 SLC19A2O60779 497 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 WDR1O75083 606 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 NTN1O95631 604 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 CPN1P15169 458 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 POU3F2P20265 443 aaPredicted RBP16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 RYKP34925 604 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 SESN3P58005 492 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 RAC1P63000 192 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 SELENOWP63302 87 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 CRYZQ08257 329 aaKnown RBP16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 SELENBP1Q13228 472 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 DUSP7Q16829 419 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 GLYATQ6IB77 296 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 LSMEM1Q8N8F7 131 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 DNAJA4Q8WW22 397 aaPredicted RBP16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 ARHGDIGQ99819 225 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 PRDM14Q9GZV8 571 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 TP63Q9H3D4 680 aaPredicted RBP16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 C12orf10Q9HB07 376 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 PAQR5Q9NXK6 330 aaPredicted RBP16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 RPH3AQ9Y2J0 694 aaPredicted RBP16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 CHST2Q9Y4C5 530 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 LIPGQ9Y5X9 500 aa16.2■□□□□ 0.18
SSSCA1-201ENST00000309328 AHRRA9YTQ3 701 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 GMFGO60234 142 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 DNAJC8O75937 253 aaPredicted RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 BMP7P18075 431 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 CD247P20963 164 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 ACAA2P42765 397 aaKnown RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 IDH2P48735 452 aaKnown RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 CLK1P49759 484 aaKnown RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 RNF144AP50876 292 aaPredicted RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 B3GALT5-AS1P59052 145 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 PLAURQ03405 335 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 KCNC4Q03721 635 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 GABPB1Q06547 395 aaPredicted RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 FOXF1Q12946 379 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 CEACAM7Q14002 265 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 NRF1Q16656 503 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms