RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TFAP2BQ92481 460 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 FAM96BQ9Y3D0 163 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 PSAT1Q9Y617 370 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 A6NL46 340 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 EEDO75530 441 aaKnown RBP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 SYPP08247 313 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 NUDT1P36639 197 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 VIPR2P41587 438 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 SAMD8Q96LT4 415 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM56-201ENST00000306085 PTGDR2Q9Y5Y4 395 aa12.65□□□□□ -0.38
TRIM56-201ENST00000306085 SUSD5O60279 629 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 INHAP05111 366 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF28P17035 718 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.39
TRIM56-201ENST00000306085 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.39
TRIM56-201ENST00000306085 HES1Q14469 280 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 FAM26DQ5JW98 314 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 PRSS48Q7RTY5 328 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 NHLRC2Q8NBF2 726 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 OR52N2Q8NGI0 321 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 ASB11Q8WXH4 323 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 SLC41A2Q96JW4 573 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 NMNAT1Q9HAN9 279 aaPredicted RBP12.65□□□□□ -0.39
TRIM56-201ENST00000306085 C1orf123Q9NWV4 160 aa12.65□□□□□ -0.39
TRIM56-201ENST00000306085 DAOAP59103 153 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CXADRP78310 365 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 LILRB4Q8NHJ6 448 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 NKX3-1Q99801 234 aaPredicted RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 TRAPPC2LH3BP13 241 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CPN1P15169 458 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CHRNEQ04844 493 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 KIAA1191Q96A73 305 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 POLHQ9Y253 713 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 MEIOCA2RUB1 952 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 MEGF11A6BM72 1044 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 RNH1P13489 461 aaKnown RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 RCAN2Q14206 197 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SLC7A13Q8TCU3 470 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 FCRL5Q96RD9 977 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CPNE5Q9HCH3 593 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CNIH4Q9P003 139 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 PABPC4LP0CB38 370 aaKnown RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 NAT1P18440 290 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 FLT3LGP49771 235 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 GPR19Q15760 415 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 NRMQ8IXM6 262 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR5L2Q8NGL0 311 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 KLHDC7BQ96G42 594 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 DOCK8Q8NF50 2099 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 DUX1O43812 170 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 PPP3CBP16298 524 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CKAP5Q14008 2032 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 C2CD4CQ8TF44 421 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 MCOLN1Q9GZU1 580 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 KCMF1Q9P0J7 381 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 TGFB1I1O43294 461 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 ILKQ13418 452 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CATSPEREQ5SY80 951 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 DRICH1Q6PGQ1 229 aaPredicted RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR2M7Q8NG81 312 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR7G3Q8NG95 312 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR1S2Q8NGQ3 325 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR5H6Q8NGV6 325 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 TLR9Q9NR96 1032 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF30P17039 623 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SHMT2P34897 504 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 DAP3P51398 398 aaKnown RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 WNT4P56705 351 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 RAB33AQ14088 237 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SMG9Q9H0W8 520 aaKnown RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 DYNLRB1Q9NP97 96 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SBK2P0C263 348 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 SLC1A3P43003 542 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CYB561A3Q8NBI2 242 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 BLNKQ8WV28 456 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 TOX4O94842 621 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 CNIH1O95406 144 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 ACVRL1P37023 503 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 LRRC18Q8N456 261 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 FRMD1Q8N878 549 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 OR8J2Q8NGG1 315 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 DPH1Q9BZG8 443 aa12.64□□□□□ -0.39
TRIM56-201ENST00000306085 NLE1Q9NVX2 485 aaPredicted RBP12.64□□□□□ -0.39
TRIM56-201ENST00000306085 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CRMP1Q14194 572 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 CTSL3PQ5NE16 218 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 RFPL4BQ6ZWI9 263 aa12.63□□□□□ -0.39
TRIM56-201ENST00000306085 TVP23CQ96ET8 276 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms