RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZNF436Q9C0F3 470 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 QRSL1Q9H0R6 528 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR51J1Q9H342 316 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 MEPEQ9NQ76 525 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 C2orf42Q9NWW7 574 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SLC23A2Q9UGH3 650 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SLC9B1P1A6NJY1 282 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 FAM157AC9JC47 383 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 NARSO43776 548 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 SUSD5O60279 629 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 NOS1APO75052 506 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 ZNF254O75437 659 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR7A10O76100 309 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PPP1R3DO95685 299 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 CXCL14O95715 111 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 AGR2O95994 175 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 EPXP11678 715 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 CCR6P51684 374 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 B2MP61769 119 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 MGAT2Q10469 447 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PGGHGQ32M88 737 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 GDF7Q7Z4P5 450 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PAQR7Q86WK9 346 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 LNX2Q8N448 690 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 GANCQ8TET4 914 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR8D1Q8WZ84 308 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 RBPMSQ93062 196 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 CTHRC1Q96CG8 243 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 CITED4Q96RK1 184 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SECISBP2Q96T21 854 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 GABRG3Q99928 467 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 FAIM2Q9BWQ8 316 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR51I1Q9H343 314 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SEMA6CQ9H3T2 930 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 KLHL31Q9H511 634 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 AUNIPQ9H7T9 357 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SEMA3GQ9NS98 782 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 HCFC1R1Q9NWW0 138 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 COA4Q9NYJ1 87 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 CALML5Q9NZT1 146 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 EMC3Q9P0I2 261 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 COMMD3Q9UBI1 195 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 DPP7Q9UHL4 492 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PHF11Q9UIL8 331 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SERTAD3Q9UJW9 196 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 LHX6Q9UPM6 363 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 KCNK7Q9Y2U2 307 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 HCFC2Q9Y5Z7 792 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 ANKRD20A5PA0PJZ0 165 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR2AG2A6NM03 316 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 MCRIP1C9JLW8 97 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PLRG1O43660 514 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 RGS9O75916 674 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 ABHD16AO95870 558 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 CHRM5P08912 532 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 LMO1P25800 156 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 TNFRSF4P43489 277 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PITPNBP48739 271 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SEC13P55735 322 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 TAF12Q16514 161 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 ZSWIM7Q19AV6 140 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 ZNF750Q32MQ0 723 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 ZNF791Q3KP31 576 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 CRTC2Q53ET0 693 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 PABPC1L2AQ5JQF8 200 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SFRP5Q5T4F7 317 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 ZNF626Q68DY1 528 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 ZNF660Q6AZW8 331 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 MBOAT2Q6ZWT7 520 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 FGD2Q7Z6J4 655 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 LHFPL3Q86UP9 236 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 LAPTM4BQ86VI4 370 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 COMMD7Q86VX2 200 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 BVESQ8NE79 360 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR13C5Q8NGS8 318 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 OR5J2Q8NH18 312 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 NEIL3Q8TAT5 605 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 TMEM255BQ8WV15 326 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 UFD1Q92890 307 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PAWRQ96IZ0 340 aaKnown RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 DPH7Q9BTV6 452 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 RANBP3Q9H6Z4 567 aaPredicted RBP5.03□□□□□ -1.6
VPS50-202ENST00000305866 SLC6A20Q9NP91 592 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 PRSS16Q9NQE7 514 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 SLC35C2Q9NQQ7 365 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 IMPAD1Q9NX62 359 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 STMN3Q9NZ72 180 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 GDE1Q9NZC3 331 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 CNIH4Q9P003 139 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 FBXL4Q9UKA2 621 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 MOKQ9UQ07 419 aa5.03□□□□□ -1.6
VPS50-202ENST00000305866 A0A1W2PR48 441 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 hCG_1807616A0A1W2PRN6 198 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 FAM221BA6H8Z2 402 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 HIDE1A8MVS5 230 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 IFI30P13284 250 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 GNSP15586 552 aa5.02□□□□□ -1.61
VPS50-202ENST00000305866 ADRA2CP18825 462 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms