RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.16□□□□□ -0.46
TRIM35-201ENST00000305364 GLIPR2Q9H4G4 154 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 SCAMP1O15126 338 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 MAGEB4O15481 346 aaPredicted RBP12.16□□□□□ -0.46
TRIM35-201ENST00000305364 NTN1O95631 604 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 SEC61A1P61619 476 aaKnown RBP12.16□□□□□ -0.46
TRIM35-201ENST00000305364 SGCGQ13326 291 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 GRM7Q14831 915 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 EIPR1Q53HC9 387 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 OR4C11Q6IEV9 310 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 OOSP2Q86WS3 158 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 FAM129CQ86XR2 697 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 HS6ST2Q96MM7 605 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 XKR8Q9H6D3 395 aa12.16□□□□□ -0.46
TRIM35-201ENST00000305364 LOC100509620A0A075B734 347 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 SURF4O15260 269 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 EMC8O43402 210 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 PPP1R3DO95685 299 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 GNRH1P01148 92 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 GKN3PP0CG01 181 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF35P13682 527 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 PRLHRP49683 370 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ACTC1P68032 377 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ACTA1P68133 377 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF750Q32MQ0 723 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 OLFML2AQ68BL7 652 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 HEPHL1Q6MZM0 1159 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 BEST3Q8N1M1 668 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 TMIEQ8NEW7 156 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 OR4K13Q8NH42 304 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 SYNPRQ8TBG9 265 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 SCLYQ96I15 445 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 OR14A2Q96R54 314 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 C1QTNF2Q9BXJ5 285 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 MED17Q9NVC6 651 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 LIPT1Q9Y234 373 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 NOP16Q9Y3C1 178 aaKnown RBP12.15□□□□□ -0.46
TRIM35-201ENST00000305364 NPFFR2Q9Y5X5 522 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 MEIS3P1A6NDR6 274 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 BET1O15155 118 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 PRAMEF2O60811 474 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ATP1B1P05026 303 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 PDE7AQ13946 482 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 MAPK14Q16539 360 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 SCGB2B2Q4G0G5 96 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 BEX5Q5H9J7 111 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 YIPF5Q969M3 257 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF514Q96K75 400 aaPredicted RBP12.15□□□□□ -0.46
TRIM35-201ENST00000305364 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 TRPV4Q9HBA0 871 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 RALGAPA2Q2PPJ7 1873 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ACOD1A6NK06 481 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 KDM4EB2RXH2 506 aaPredicted RBP12.15□□□□□ -0.46
TRIM35-201ENST00000305364 F5H0A9 414 aaPredicted RBP12.15□□□□□ -0.46
TRIM35-201ENST00000305364 RASGRP1O95267 797 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 CHRM4P08173 479 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 HLA-FP30511 346 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ART1P52961 327 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 ARTNQ5T4W7 220 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 COX18Q8N8Q8 333 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 OR52E2Q8NGJ4 325 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 CXorf40AQ8TE69 158 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 NUS1Q96E22 293 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 UQCC2Q9BRT2 126 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 MRTO4Q9UKD2 239 aaKnown RBP12.15□□□□□ -0.46
TRIM35-201ENST00000305364 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 PLEKHA6Q9Y2H5 1048 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 STON1Q9Y6Q2 735 aa12.15□□□□□ -0.46
TRIM35-201ENST00000305364 SEC14L5O43304 696 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 PAK4O96013 591 aaPredicted RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 TLX1P31314 330 aaPredicted RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 BAMBIQ13145 260 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 KIAA1324Q6UXG2 1013 aaKnown RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 HSPA12BQ96MM6 686 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 HRASLSQ9HDD0 168 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 USP36Q9P275 1121 aaKnown RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 TRAV27A0A087WT01 109 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 D6RAR5 112 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 DRD2P14416 443 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 HMGA1P17096 107 aaKnown RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 FPR3P25089 353 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 CCR4P51679 360 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 PRAMEF17Q5VTA0 474 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 GPAT4Q86UL3 456 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 POGLUT1Q8NBL1 392 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
TRIM35-201ENST00000305364 ACSS1Q9NUB1 689 aaPredicted RBP12.14□□□□□ -0.47
TRIM35-201ENST00000305364 UPB1Q9UBR1 384 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms