RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IER3IP1Q9Y5U9 82 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ABCC6O95255 1503 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CA12O43570 354 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SOD2P04179 222 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 FUT1P19526 365 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 RPS27AP62979 156 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 UBA52P62987 128 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SLCO2A1Q92959 643 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ANKRD9Q96BM1 317 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 FCRL3Q96P31 734 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 INTS14Q96SY0 518 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 GNB4Q9HAV0 340 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 GSTP1P09211 210 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 UBL4AP11441 157 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 LMAN2Q12907 356 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 IL20RBQ6UXL0 311 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 TSPYL5Q86VY4 417 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SPARTQ8N0X7 666 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 RNF175Q8N4F7 328 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SDR9C7Q8NEX9 313 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 BRIX1Q8TDN6 353 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CPNE4Q96A23 557 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 QRSL1Q9H0R6 528 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 OLAHQ9NV23 265 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 TRAPPC2LQ9UL33 140 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 OSGIN2Q9Y236 505 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SDHDO14521 159 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 EGFP01133 1207 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PTHP01270 115 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PPT1P50897 306 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CCL14Q16627 93 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 VHLLQ6RSH7 139 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ALOXE3Q9BYJ1 711 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PITHD1Q9GZP4 211 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CPNE5Q9HCH3 593 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CNIH4Q9P003 139 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PRDX3P30048 256 aaKnown RBP9.78□□□□□ -0.84
CLIP1-201ENST00000302528 PSMB10P40306 273 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SLC9A3R2Q15599 337 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 RNLSQ5VYX0 342 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CLECL1Q8IZS7 167 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 RHEBL1Q8TAI7 183 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 SACM1LQ9NTJ5 587 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 ANKMY1Q9P2S6 941 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 CAMK2AQ9UQM7 478 aa9.78□□□□□ -0.84
CLIP1-201ENST00000302528 RGPD8O14715 1765 aaPredicted RBP9.77□□□□□ -0.84
CLIP1-201ENST00000302528 LRP5LA4QPB2 252 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 CHEK1O14757 476 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 HLA-AP01891 365 aaKnown RBP9.77□□□□□ -0.84
CLIP1-201ENST00000302528 FGF3P11487 239 aaPredicted RBP9.77□□□□□ -0.84
CLIP1-201ENST00000302528 OMGP23515 440 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 GABRA4P48169 554 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 OGFOD3Q6PK18 319 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF551Q7Z340 670 aaPredicted RBP9.77□□□□□ -0.84
CLIP1-201ENST00000302528 AMDHD1Q96NU7 426 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 MS4A4EQ96PG1 132 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 CPEB1Q9BZB8 566 aaKnown RBP9.77□□□□□ -0.84
CLIP1-201ENST00000302528 NOX3Q9HBY0 568 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 SLC39A9Q9NUM3 307 aa9.77□□□□□ -0.84
CLIP1-201ENST00000302528 C17orf105B2RV13 164 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 BET1O15155 118 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 P2RX6O15547 441 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 CA5AP35218 305 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 LGALS4P56470 323 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 CLDN8P56748 225 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 PCBD1P61457 104 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 TLE4Q04727 773 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 GAB1Q13480 694 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 MPEG1Q2M385 716 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF718Q3SXZ3 478 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 RPS26P11Q5JNZ5 115 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 NDUFAF5Q5TEU4 345 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 USP51Q70EK9 711 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF761Q86XN6 746 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 PLPP5Q8NEB5 264 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SLC30A7Q8NEW0 376 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SLC2A13Q96QE2 648 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 NKX3-1Q99801 234 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 NMNAT1Q9HAN9 279 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 COQ4Q9Y3A0 265 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 PSAT1Q9Y617 370 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 KIF1AQ12756 1690 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 hCG_1809904A0A1W2PP81 198 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 A0A1W2PPE2 198 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 A0A1W2PR64 198 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 A0A1W2PRV1 198 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 COCHO43405 550 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 CCL5P13501 91 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 CPT2P23786 658 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 TRHRP34981 398 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 MC3RP41968 323 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 TAS2R19P59542 299 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 RAB11AP62491 216 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 SLC25A11Q02978 314 aaKnown RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 ELAVL3Q14576 367 aaKnown RBP9.77□□□□□ -0.85
CLIP1-201ENST00000302528 TECRLQ5HYJ1 363 aa9.77□□□□□ -0.85
CLIP1-201ENST00000302528 C9orf152Q5JTZ5 239 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms