RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PEX12O00623 359 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 DOK2O60496 412 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 KLHL18O94889 574 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TEAD1P28347 426 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 BSGP35613 385 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 C4orf46Q504U0 113 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 ESCO2Q56NI9 601 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 SAXO2Q658L1 398 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 CAMKVQ8NCB2 501 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 OR6N2Q8NGY6 317 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 CCL4L1Q8NHW4 92 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 SLC25A46Q96AG3 418 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 GON7Q9BXV9 100 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 LRRN3Q9H3W5 708 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
SDC2-201ENST00000302190 OR6C2Q9NZP2 312 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 NEUROG3Q9Y4Z2 214 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 PCDHGB2Q9Y5G2 931 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TVP23AA6NH52 213 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 B4DXG7 233 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 FABP7O15540 132 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 CSTAP01040 98 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 IGFBP4P22692 258 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TSPAN31Q12999 210 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 GAS6Q14393 721 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 FCN2Q15485 313 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 SMAD2Q15796 467 aaKnown RBP13.09□□□□□ -0.31
SDC2-201ENST00000302190 ZNF627Q7L945 461 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 GLRX5Q86SX6 157 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TMPRSS12Q86WS5 348 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 RPLP0P6Q8NHW5 317 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 PINK1Q9BXM7 581 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 BARHL1Q9BZE3 327 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 BABAM2Q9NXR7 383 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 FTSJ1Q9UET6 329 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
SDC2-201ENST00000302190 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 A0A1W2PRQ8 180 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 MCIDASD6RGH6 385 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 RDH16O75452 317 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 CLEC3AO75596 197 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 ARL6IP5O75915 188 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 EFEMP2O95967 443 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 APEHP13798 732 aaKnown RBP13.09□□□□□ -0.31
SDC2-201ENST00000302190 MAOBP27338 520 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 KIR2DL3P43628 341 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 MAZP56270 477 aaKnown RBP13.09□□□□□ -0.31
SDC2-201ENST00000302190 HSD17B12Q53GQ0 312 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 TANGO2Q6ICL3 276 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 ABHD13Q7L211 337 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 CREB3L4Q8TEY5 395 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 ELL3Q9HB65 397 aaPredicted RBP13.09□□□□□ -0.31
SDC2-201ENST00000302190 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 CHST2Q9Y4C5 530 aa13.09□□□□□ -0.31
SDC2-201ENST00000302190 EIF1AYO14602 144 aaKnown RBP13.08□□□□□ -0.31
SDC2-201ENST00000302190 XKRYO14609 159 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 ARSBP15848 533 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 NUDT1P36639 197 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 PRSS53Q2L4Q9 553 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 TMEM44Q2T9K0 475 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 CCDC190Q86UF4 302 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 TMEM99Q8N816 258 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.31
SDC2-201ENST00000302190 TNFRSF13CQ96RJ3 184 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 PDCD1LG2Q9BQ51 273 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 UBQLN3Q9H347 655 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 CENPMQ9NSP4 180 aa13.08□□□□□ -0.31
SDC2-201ENST00000302190 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 CLDN4O14493 209 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 LILRB3O75022 631 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 TFPIP10646 304 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 ANXA3P12429 323 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 CPMP14384 443 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 CRYBA2P53672 197 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
SDC2-201ENST00000302190 HSF2Q03933 536 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 SCGB2B2Q4G0G5 96 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 TMEM35AQ53FP2 167 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 TMPRSS9Q7Z410 1059 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 FTMTQ8N4E7 242 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 OR4M1Q8NGD0 313 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 COQ8AQ8NI60 647 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 THAP3Q8WTV1 239 aaPredicted RBP13.08□□□□□ -0.32
SDC2-201ENST00000302190 PELI2Q9HAT8 420 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 PHF11Q9UIL8 331 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 FBXL3Q9UKT7 428 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 PRPH2P23942 346 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 GABRA5P31644 462 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 DDOSTP39656 456 aa13.08□□□□□ -0.32
SDC2-201ENST00000302190 RPS27P42677 84 aaKnown RBP13.08□□□□□ -0.32
SDC2-201ENST00000302190 PITPNBP48739 271 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms