RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 GPR27Q9NS67 375 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 STUB1Q9UNE7 303 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 SSR3Q9UNL2 185 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 TMEM184BQ9Y519 407 aaPredicted RBP20.3■□□□□ 0.84
TPM4-201ENST00000300933 PLOD3O60568 738 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 PGDP52209 483 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 PLAURQ03405 335 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 SMARCD3Q6STE5 483 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 ZNF619Q8N2I2 560 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 SAMD8Q96LT4 415 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 WDFY2Q96P53 400 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 GFM1Q96RP9 751 aaKnown RBP20.3■□□□□ 0.84
TPM4-201ENST00000300933 SLC38A3Q99624 504 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 PRELID1Q9Y255 219 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 LSM2Q9Y333 95 aaKnown RBP20.3■□□□□ 0.84
TPM4-201ENST00000300933 HSPB11Q9Y547 144 aa20.3■□□□□ 0.84
TPM4-201ENST00000300933 FLYWCH1Q4VC44 716 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 XKRXQ6PP77 449 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.29■□□□□ 0.84
TPM4-201ENST00000300933 CDRT4Q8N9R6 151 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 ATP6V1C2Q8NEY4 427 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 UCKL1Q9NWZ5 548 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 SEC14L4Q9UDX3 406 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 YARS2Q9Y2Z4 477 aaKnown RBP20.29■□□□□ 0.84
TPM4-201ENST00000300933 ALG5Q9Y673 324 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 GNB5O14775 395 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 FOXS1O43638 330 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 ADAM11O75078 769 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 OR2B3O76000 313 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 CD38P28907 300 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 CAV3P56539 151 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 EFNB1P98172 346 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 FZD5Q13467 585 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 OCLNQ16625 522 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 NDUFA9Q16795 377 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 LHFPL3Q86UP9 236 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 ZFP41Q8N8Y5 198 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 PTCHD1Q96NR3 888 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 SOHLH2Q9NX45 425 aa20.29■□□□□ 0.84
TPM4-201ENST00000300933 FAM221BA6H8Z2 402 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 GSTM3P21266 225 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 CSNK1EP49674 416 aaKnown RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 GZMKP49863 264 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 STX4Q12846 297 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 NCF4Q15080 339 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 OR1Q1Q15612 314 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 PRAMEF17Q5VTA0 474 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 ANKK1Q8NFD2 765 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 GATAD2BQ8WXI9 593 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 CNOT9Q92600 299 aaKnown RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 NACC2Q96BF6 587 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 RNFT2Q96EX2 444 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 SPEF1Q9Y4P9 236 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 IGHV5-51A0A0C4DH38 117 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 HYKKA2RU49 373 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 SLC35F4A4IF30 521 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 STK25O00506 426 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 NOS1APO75052 506 aaPredicted RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 PIPP12273 146 aaPredicted RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 APEX1P27695 318 aaKnown RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 RAB38P57729 211 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 RHAGQ02094 409 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 ZNF267Q14586 743 aaPredicted RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 OR4F15Q8NGB8 312 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 FGF11Q92914 225 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 SLC25A46Q96AG3 418 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 MMABQ96EY8 250 aaPredicted RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 SPACA7Q96KW9 195 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 PRSS27Q9BQR3 290 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 HDHD5Q9BXW7 423 aa20.28■□□□□ 0.84
TPM4-201ENST00000300933 TRIM45Q9H8W5 580 aaPredicted RBP20.28■□□□□ 0.84
TPM4-201ENST00000300933 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 IQCMA0A1B0GVH7 501 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 ZC3H12DA2A288 527 aaKnown RBP20.27■□□□□ 0.84
TPM4-201ENST00000300933 MYL12BO14950 172 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 AGR2O95994 175 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 IGKV1D-16P01601 117 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 PROS1P07225 676 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 IFNGR2P38484 337 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 RAB25P57735 213 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 POU6F2P78424 691 aaPredicted RBP20.27■□□□□ 0.84
TPM4-201ENST00000300933 PSG6Q00889 435 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 RPL6Q02878 288 aaKnown RBP20.27■□□□□ 0.84
TPM4-201ENST00000300933 SMAD4Q13485 552 aaKnown RBP20.27■□□□□ 0.84
TPM4-201ENST00000300933 FCRLBQ6BAA4 426 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 ARHGEF39Q8N4T4 335 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 LINC00471Q8N535 108 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 NANOGP1Q8N7R0 232 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 TMEM163Q8TC26 289 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 RBM18Q96H35 190 aaKnown RBP20.27■□□□□ 0.84
TPM4-201ENST00000300933 ARPC5LQ9BPX5 153 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 MED20Q9H944 212 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 TXNL4BQ9NX01 149 aaKnown RBP20.27■□□□□ 0.84
TPM4-201ENST00000300933 NLKQ9UBE8 527 aa20.27■□□□□ 0.84
TPM4-201ENST00000300933 MSL3P1P0C860 447 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 NID1P14543 1247 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 MAKP20794 623 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 ALAS2P22557 587 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 PRKACBP22694 351 aa20.27■□□□□ 0.83
TPM4-201ENST00000300933 CSTF1Q05048 431 aaKnown RBP20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms