RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TMEM45AQ9NWC5 275 aa12.73□□□□□ -0.37
CHRFAM7A-201ENST00000299847 C1SP09871 688 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GAAP10253 952 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 C7P10643 843 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 EXOSC6Q5RKV6 272 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 VASH1Q7L8A9 365 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ADAMTS18Q8TE60 1221 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZFAND2BQ8WV99 257 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RSC1A1Q92681 617 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GMLQ99445 158 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DCAF13Q9NV06 445 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF140P52738 457 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PLAG1Q6DJT9 500 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NDUFAF7Q7L592 441 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 BATF2Q8N1L9 274 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SNX18Q96RF0 628 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GALNT9Q9HCQ5 603 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OLAHQ9NV23 265 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 EMCNQ9ULC0 261 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AP1G1O43747 822 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 C1orf105O95561 183 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SERPINE2P07093 398 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRAMEF20Q5VT98 475 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC22A10Q63ZE4 541 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR13C2Q8NGS9 318 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC46A2Q9BY10 475 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CBLCQ9ULV8 474 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 IFNA4P05014 189 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RPS2P15880 293 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 C21orf33P30042 268 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CLDN12P56749 244 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR2G6Q5TZ20 316 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CGB2Q6NT52 195 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GPR148Q8TDV2 347 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HAS2Q92819 552 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MYADMQ96S97 322 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 INIPQ9NRY2 104 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 IL17CQ9P0M4 197 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ENPP5Q9UJA9 477 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CD300LBA8K4G0 201 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 MSR1P21757 451 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 RPS18P62269 152 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SFRP5Q5T4F7 317 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AGAP7PQ5VUJ5 663 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AGAP6Q5VW22 663 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 UNQ6126/PRO20091Q6UXV3 157 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DPPA4Q7L190 304 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 AGAP4Q96P64 663 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TSPAN10Q9H1Z9 355 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TAS2R16Q9NYV7 291 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SUSD2Q9UGT4 822 aa12.72□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TRBV4-1A0A0J9YWV2 114 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PRAMEF26H0Y7S4 382 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ADAM12O43184 909 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SSX4O60224 188 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF44P15621 663 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ITGB7P26010 798 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CPZQ66K79 652 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ADAMTS16Q8TE57 1224 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DTD2Q96FN9 168 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR10A5Q9H207 317 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR10A2Q9H208 303 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 FUOMA2VDF0 154 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 GLO1Q04760 184 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SPCS2Q15005 226 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TBPL2Q6SJ96 375 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SLC35D2Q76EJ3 337 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 DCP2Q8IU60 420 aaKnown RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SPARTQ8N0X7 666 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HYLS1Q96M11 299 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR52D1Q9H346 318 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 SDR39U1Q9NRG7 319 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 HIF1ANQ9NWT6 349 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 H3BUI4 141 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LTB4RQ15722 352 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PROX2Q3B8N5 592 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 OR2A12Q8NGT7 310 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 LIN37Q96GY3 246 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 TAS2R8Q9NYW2 309 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms